Trichosurus vulpecula (common brushtail): 118848128
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Entry
118848128 CDS
T10126
Symbol
SOX2
Name
(RefSeq) transcription factor SOX-2
KO
K16796
transcription factor SOX2 (SOX group B)
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04390
Hippo signaling pathway
tvp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
118848128 (SOX2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
118848128 (SOX2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118848128 (SOX2)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
118848128 (SOX2)
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Ortholog
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GFIT
Motif
Pfam:
SOXp
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
118848128
NCBI-ProteinID:
XP_036612783
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All DBs
Position
4:255818711..255819793
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AA seq
349 aa
AA seq
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MYNMLETDLKPPGPQQTSGGGGGGGGGGGGGGGPNSTSAGGTNQKNSPDRVKRPMNAFMV
WSRGQRRKMAQENPKMHNSEISKRLGAEWKLLSEAEKRPFIDEAKRLRALHMKEHPDYKY
RPRRKTKTLLKKDKYTLPGGLLAPGGNSMGGGVGVGAGGLGGGVNQRMDSYAHMNGWSNG
GYGMMQEQLGYPQHPGLNAHNAAAAAAAAAAAAQMQPMHRYDVSALQYNSMTSSQTYMNG
SPTYSSMAYSQQAAPGGGAGGGGGGAMALGSMGSVVKSEASSSPPVVTSSSHSRAPCQAG
DLRDMISMYLPGAEVPDTSAPSRLHMSQHYQGAPVPGTAINGTLPLSHM
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgtacaacatgctggagaccgacctcaagcctcccggcccgcagcaaacttcggggggc
ggcggcggcggcggcggcggcggcggtggcggcggcggccctaactccacgtcggcgggc
ggcacgaaccagaagaacagcccagaccgcgtaaagcggcccatgaacgctttcatggtg
tggtcccgcgggcagcggcgcaagatggcccaggagaaccccaagatgcacaactcggag
atcagcaagcgtctgggagccgagtggaagctgctgtctgaggccgagaagcggcccttc
atcgacgaggccaagcggctgcgcgccttgcacatgaaggaacacccggactacaagtac
cggccgcgccggaaaaccaagacgctgctcaagaaggacaaatacacgctgcccggcggc
ctgctggctcccggcggcaacagcatgggcggcggcgtcggcgtcggggccggtggcctg
ggcggcggagtcaaccagcgcatggacagctacgcgcacatgaacggctggagcaacggc
ggctacggcatgatgcaggagcagctgggctatccgcagcacccggggctcaacgcgcac
aacgcggcggcggcagcggccgccgcggccgcggccgcccagatgcagcccatgcaccgc
tacgacgtgagtgccctgcagtacaactccatgacgagctcgcagacttacatgaacggc
tcgcccacctacagcagcatggcgtactcgcagcaggccgcccccggtggcggcgctggc
ggaggcggcggcggcgccatggccctgggctccatgggctccgtggtcaagtcagaggcc
agctccagcccccccgtggtcacctcgtcgtctcactccagggcgccctgccaggccggg
gaccttcgggacatgatcagcatgtacctgcccggcgccgaggtgcccgatacctcggcg
cccagcagacttcacatgtcccagcactaccagggcgcgccggtgccgggcacggccatc
aacggcacgctgcccctgtctcacatgtga
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