Trichosurus vulpecula (common brushtail): 118848641
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Entry
118848641 CDS
T10126
Symbol
CLTC
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04142
Lysosome
tvp04144
Endocytosis
tvp04721
Synaptic vesicle cycle
tvp04961
Endocrine and other factor-regulated calcium reabsorption
tvp05016
Huntington disease
tvp05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118848641 (CLTC)
04142 Lysosome
118848641 (CLTC)
09150 Organismal Systems
09155 Excretory system
04961 Endocrine and other factor-regulated calcium reabsorption
118848641 (CLTC)
09156 Nervous system
04721 Synaptic vesicle cycle
118848641 (CLTC)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
118848641 (CLTC)
09164 Neurodegenerative disease
05016 Huntington disease
118848641 (CLTC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118848641 (CLTC)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvp04147
]
118848641 (CLTC)
Membrane trafficking [BR:
tvp04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
118848641 (CLTC)
Exosome [BR:
tvp04147
]
Exosomal proteins
Proteins found in most exosomes
118848641 (CLTC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
TPR_1
Motif
Other DBs
NCBI-GeneID:
118848641
NCBI-ProteinID:
XP_036613527
LinkDB
All DBs
Position
4:complement(169016551..169092200)
Genome browser
AA seq
1682 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQAQVVIIDMNDPSN
PIRRPISADSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNALFAQGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKYESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQVQKIVLYAKKVGYTPDWIFLLRNVMRISPDQGQQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTAFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHIAQLCEKAGLLQRALEHFTDLYDIKRAVVHTHLLNPEWLVNYFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLIELFESFKSFEGLFYFLGSIVN
FSQDPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDLELINVCNENSLFKSLSRYLVRRKDPELWGSVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGMVKEAIDSYIKADDPSSYMEV
VQAANTSGNWEELVKYLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYRAIQFYLEFKPLLLNDLLMVLSPRLDHTRAVNYFS
KVKQLPLVKPYLRSVQNHNNKSVNESLNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDRLYKDAMQYASESKDTELAEELLQWFLQE
EKRECFGACLFTCYDLLRPDVVLETAWRHNIMDFAMPYFIQVMKEYLSKVDAIKEKVDKL
DASESLRKEEEQATETQPIVYGQPQLMLTAGPSVAVPPQAPFGYGYTAPPYGQPQPGFGY
SM
NT seq
5049 nt
NT seq
+upstream
nt +downstream
nt
atggcccagatcctgcccatccgtttccaggagcatctccagctccagaatctgggtatc
aacccagcaaatattggcttcagtactttgactatggagtcagataaattcatctgcatt
agagaaaaagtaggagaacaggcccaggtggtaatcattgatatgaatgatccaagtaat
cccattcgtcgaccaatttcagctgacagcgccatcatgaatccagccagcaaagtaatt
gcattaaaagctggaaaaacacttcagatatttaacattgaaatgaaaagtaaaatgaag
gctcataccatgactgatgatgtcaccttttggaaatggatttctttgaacactgttgcc
cttgttacggacaatgcagtctatcattggagtatggaaggagagtcacaaccagtgaag
atgtttgatcgccattctagtcttgctggttgccagattattaactatcgtacagatgca
aagcagaagtggttacttcttactggcatctctgcacagcaaaatcgtgtggtgggagcc
atgcagctttattctgtagacagaaaagtgtctcagcccattgaaggacatgctgctagc
tttgcacaatttaagatggaaggaaatgctgaagagtcaacactgttttgttttgcagta
agggggcaagctggaggcaagttacatatcattgaagtcggcacaccgcctacagggaac
cagccttttccaaagaaagcagtagatgtcttttttcctccagaagcacaaaatgacttt
cctgtggcaatgcagatcagcgaaaaacatgatgtggtattcttgattaccaaatatggc
tatatccatttatatgacctggagactggtacctgcatctacatgaatagaatcagtgga
gaaaccatctttgtcactgcacctcatgaagcaacagctggaattattggtgtaaacaga
aagggacaagtgctttcggtatgtgtggaggaagagaatataattccttacatcaccaac
gtcctacagaatcctgatctggctttgagaatggctgtgcgtaacaacttagctggagct
gaagagctttttgcccggaaatttaatgctctttttgcacagggaaattactcagaggca
gcaaaggtggctgctaatgcaccaaagggaattttacgtactccagacaccattcgccgg
ttccagagtgttccagcacaaccaggtcagacttcacctctactccagtacttcggaatc
cttttagaccaaggccagctgaacaaatatgaatctttagaactgtgtaggcctgtactt
caacaggggcgtaaacagctgctagagaaatggttaaaagaagataagctggagtgttca
gaagaattgggtgatctagtaaagtctgtggatcctacattggcacttagtgtgtaccta
agggctaacgttcccaataaagttatccagtgctttgcagaaacaggccaagtacagaag
attgtgttgtatgccaaaaaagttggttatactccagactggatctttctgttgagaaac
gtaatgaggatcagcccagatcaaggtcaacagtttgctcaaatgctggttcaagacgaa
gaaccacttgctgatataacacagattgttgatgtgttcatggaatacaacttaatccag
cagtgcactgcatttttactcgatgccctgaaaaataatcgcccatctgagggtcccctg
caaacacggttgcttgagatgaaccttatgcatgcccctcaagttgcagatgctatttta
gggaaccaaatgtttacacattatgaccgggctcatattgctcaactctgtgaaaaggct
ggcctattacagcgtgcactggagcatttcactgatctgtatgatattaagcgtgcagtt
gttcacacccatcttctgaaccctgagtggttagtcaattactttggttccttatctgtg
gaagattccctggagtgcctcagggctatgctttctgccaatattcgccaaaacctacag
atttgtgtccaggtggcttccaagtatcatgaacagctttcaactcagtccctgattgaa
ctgtttgaatcttttaagagttttgaaggacttttttatttcctgggatccattgtcaac
ttcagtcaggacccagatgtgcactttaaatatattcaggcagcctgtaagactgggcag
atcaaagaagtagagagaatctgccgagagagcaactgctatgatccagagcgtgtcaag
aactttctcaaggaagcaaaactaacagaccagttaccactcatcattgtttgtgatcga
tttgactttgttcatgacctggtgctgtacttatatagaaataatctccagaaatatatt
gagatttatgtgcagaaggtgaatccaagtcgtcttcctgtggtcattggaggattgctt
gatgttgattgctctgaagatgtcataaagaacttgattcttgtagtgagaggtcagttc
tctactgatgagcttgttgctgaagttgaaaagaggaacagattaaaacttctactgcct
tggctagaagccagaattcatgagggttgtgaggagcctgctactcacaatgcattagct
aaaatctacattgacagtaacaacaacccggaaagatttcttcgtgaaaatccctattat
gacagtcgtgttgttggaaagtattgtgagaagagggatccccacttagcatgtgtggct
tatgaacgtggccagtgtgatctggaacttattaatgtttgcaatgaaaactctcttttc
aaaagtctttcccgctatttggttcgccgtaaggatccagagctttggggtagtgttctc
ttagagagcaacccttacaggaggcccctgattgaccaggttgtacagacagccttgtct
gagactcaggatcctgaagaggtttctgttactgtcaaggctttcatgactgcagacctt
cccaatgaactcatcgaactattggagaaaattgttcttgacaactcggtgttcagtgaa
cacaggaatctgcaaaacctgcttatcctcactgcaattaaagccgaccgtacccgtgtt
atggaatatatcaaccgactagataattatgatgctccagatattgctaatattgcaatc
agcaatgaattgtttgaggaggcatttgccattttcaggaaatttgatgtcaatacttca
gctgtgcaggtcttgattgaacacattggaaacctggatcgtgcatatgagtttgctgaa
cgctgcaatgaacctgcagtatggagtcagcttgcaaaggctcagttgcagaaaggaatg
gtgaaagaagccattgattcctatattaaagcagatgatccttcatcttacatggaagtt
gttcaggctgctaatactagtggcaactgggaagaattggttaagtacctgcaaatggct
cgcaagaaggcccgtgagtcttatgtagaaacggaactgatctttgctctggctaagacc
aatcgccttgcagagctggaggaattcatcaatgggccaaataatgctcacattcaacaa
gttggggaccgttgttatgatgagaaaatgtatgatgctgctaaattgttgtacaacaat
gtttccaattttggccgcttggcgtctaccttagttcacttgggtgaatatcaggcagct
gttgatggggcccggaaagctaacagtactagaacgtggaaggaggtctgctttgcctgt
gtagatgggaaagaattccgtttggctcagatgtgtgggcttcatattgtggtgcacgca
gatgagctggaggagctcataaactactatcaggatcgaggatactttgaagaactgata
accatgttggaagcagcactggggcttgagcgagcccacatggggatgtttactgaatta
gcaattctctactcaaaattcaagccacagaaaatgagggaacatttggagttgttctgg
tccagagtgaatattccaaaggtgctaagggctgcagaacaagcacatctttgggcagag
ctggtatttttatacgataaatatgaagaatatgacaatgccataattactatgatgaat
catccaacagatgcatggaaagaaggacaatttaaagatatcattaccaaggtagccaat
gtggaactatattatagagcaatacaattctatttagaattcaagcctctgctactaaat
gacctgctgatggtactgtctccaagactggatcacactcgtgctgtcaactatttcagt
aaggttaaacagcttccactggttaaaccatacctacgctcagttcaaaaccataacaac
aaatcagtgaatgaatcattgaataacctcttcattacagaagaagattaccaggcattg
agaacgtcaatagatgcgtatgacaattttgataatatctctcttgctcaacgtttggag
aaacatgaactcattgagtttagaagaattgctgcatatctcttcaaaggcaacaatcgc
tggaaacagagtgtagagctatgcaagaaagatcgactttataaggatgcaatgcagtat
gcctctgaatcaaaagatacagagttggcagaagaactgctacagtggtttttgcaggaa
gaaaagagagagtgctttggagcttgtctcttcacctgttatgatctcttaaggccagat
gttgtcttggaaactgcatggagacacaatatcatggactttgccatgccctattttatc
caggtcatgaaggaatacttgtccaaggttgatgcaataaaggaaaaggtggataaactg
gatgcttctgaatctctgagaaaagaagaggagcaagctacagagacgcaacctattgtt
tacggtcagccgcagttgatgttgacagcagggcccagcgtggcagttcctccccaagca
ccttttggctatggctacactgcacccccctacgggcagccacaacctggctttgggtac
agcatgtga
DBGET
integrated database retrieval system
