Trichosurus vulpecula (common brushtail): 118848689
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Entry
118848689 CDS
T10126
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25-like isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04064
NF-kappa B signaling pathway
tvp04622
RIG-I-like receptor signaling pathway
tvp05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04064 NF-kappa B signaling pathway
118848689
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
118848689
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
118848689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118848689
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118848689
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118848689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
zf-RING_UBOX
zf-C3HC4_4
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
Sina_RING
ANCHR-like_BBOX
zf-RING_6
zf-ANAPC11
EGF_integrin
zf-Nse
PRY
Motif
Other DBs
NCBI-GeneID:
118848689
NCBI-ProteinID:
XP_036613584
LinkDB
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Position
4:complement(199828131..199856538)
Genome browser
AA seq
603 aa
AA seq
DB search
MSNSNSLCIFEDRVLCPICLEVFRNPVTTACGHNFCMNCLQDYWDHQAAMGETPYCPQCR
EVFTSRPHLRKNVILGEIVACFTQNQTPAPNRAVAGPGDIPCDYCSPEKLKSVKSCLQCA
ASLCENHLRTHYEDQVFQGHRLLEPIWDLKAQLCRKHRKLQRLYCRTEGCCVCGACLLEE
HKNHDTIPLEEERARKEVEVRKVQANVENQMLIIASDSQKHRGRVAFLTSWEVPPRLNNL
WNALLLLGSASPRWREVRDSSPLPLQKLIQTVREDVNRCFADIGREVKRLQVKVLEFVEK
EEAAALGQLGSSIQQSHSRLLELEGDSVWLRSLLTNQSDQQFLEEFPRLKRFPACTESLL
GTTCEETNSFPRLSEILAELRAQLAVVGLRFVNQLLLKGIKMRSYEVLPPAVDRKNLLKC
YCNLNFDSATASEELFLFKETHSVLNLGILLEPYASGPFPGFNQWPQVLCTQSMAEGQHY
WEAEVSNSWVCVGVTYSCNPLPSGRPRRNIVYLIGRNSASWCLEWDSLKFSVWHNNTQTV
LQGGYYRTIGVALDYPAGCLSFYGVAGGMSLIYRFLTNFLEPLYPAVMVSSGASITLKQY
PES
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacagcaacagcctctgcatttttgaagaccgggtcctatgccccatctgcctg
gaagtgttccgcaacccggtcaccacagcttgcgggcacaacttttgtatgaactgtctc
caggactactgggaccaccaggcagccatgggagaaacaccttactgcccccagtgccgg
gaggtcttcacctccagaccccaccttcgaaagaatgtcatcttaggagagatcgtggcc
tgtttcacccagaaccagaccccagcgccaaacagagcagtggctgggcctggagatatc
ccttgtgattactgttccccagaaaaactcaaatcggtcaagtcatgcctgcaatgtgca
gcctccctctgcgagaaccaccttcgcactcattatgaggaccaggttttccaggggcac
cgtctgctggagcctatctgggatctcaaagcgcagctatgccgcaaacaccgaaaactt
cagcggctctactgccggacggagggttgctgcgtgtgtggggcctgcctgttggaggag
cacaaaaatcatgacaccatcccgctggaggaagaacgagcccgcaaggaggtagaagtc
cggaaagtccaagccaatgtagagaaccagatgttgatcatcgcatctgatagccagaag
catcgtggtcgggtagctttcctcacgagctgggaagtacctcccaggctgaacaacttg
tggaatgcactcctgctcttgggttcagcatccccaaggtggagggaggtcagggattcc
tctcccctccccctccagaaactgatccagacagtacgagaggatgtcaaccgttgtttt
gcggacatcgggagggaggtaaagcggctgcaggtgaaagtcttggagtttgtggaaaag
gaggaggcagctgcccttggtcagctgggcagctctatccaacaaagccacagtcgcctc
ttagaactagagggtgatagtgtctggctccggagcctgcttaccaaccagagtgaccag
cagtttttagaggagttcccgaggttgaagcggttcccagcctgcacagagtcactgctg
ggtaccacgtgtgaagaaacaaacagctttcctcggctctcagagatcctggctgagctt
cgggcccagctggctgtggtgggcctccgcttcgtcaaccagcttcttctaaagggaatt
aagatgcgttcctatgaggtgttgcccccagctgtggacaggaagaatctactgaagtgc
tactgcaacttgaactttgactcagccacggccagcgaggagctgttcctgttcaaggag
acccactcggtgctgaacctgggcatcctcctcgagccctacgcctcgggccccttcccg
gggttcaaccagtggccccaggtgctgtgcacccaaagcatggccgagggccaacactac
tgggaggccgaggtgtccaactcgtgggtctgcgtgggcgtcacgtacagctgcaacccc
ctgcccagcgggcgaccccggcgcaacatcgtctacctgatcggccgcaacagcgcctcg
tggtgcctcgagtgggactcgctcaagttctcggtgtggcacaataacacgcagacggtg
cttcaggggggctactaccgcaccatcggcgtggccctggactacccggccggctgcctc
tccttctacggcgtggccgggggcatgagcctcatataccgcttcctcaccaatttcctg
gagccgctttacccggcagtcatggtcagcagcggggcctccatcaccctcaagcagtac
cccgagtcttaa
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