KEGG   Trichosurus vulpecula (common brushtail): 118849937
Entry
118849937         CDS       T10126                                 
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp02010  ABC transporters
tvp04976  Bile secretion
tvp05206  MicroRNAs in cancer
tvp05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    118849937
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    118849937
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    118849937
  09162 Cancer: specific types
   05226 Gastric cancer
    118849937
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tvp02000]
    118849937
   04147 Exosome [BR:tvp04147]
    118849937
   04090 CD molecules [BR:tvp04090]
    118849937
Enzymes [BR:tvp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     118849937
Transporters [BR:tvp02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    118849937
Exosome [BR:tvp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118849937
CD molecules [BR:tvp04090]
 Proteins
  118849937
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_22 AAA_16 Zeta_toxin Rad17 RsgA_GTPase AAA AAA_5 DUF815 AAA_29 AAA_15 G-alpha AAA_14 nSTAND1 AAA_7 tRNA_lig_kinase AAA_30 APS_kinase nSTAND3 AAA_19 DUF87 NTPase_1 DUF2057
Other DBs
NCBI-GeneID: 118849937
NCBI-ProteinID: XP_036614931
LinkDB
Position
5:53323379..53819742
AA seq 1282 aa
MSWEAGSNGSAGSPTEEMMELKSDSKRKKSKKKEKEPTVGTFAMFRYSDWLDRLYMVLGT
TAAVIHGTGLPLIMLIFGEMTDSFADMGNANLTYTDVNNSTENPYDQLEEQMTTYAYYYT
AVGFGVLVAAYIQVAFWTLAAGRQIKKIRQNFFHSVMRQEIGWFDIHDVGELNTRLADDV
SKINDGIGDKIGILFQALATFLTGFIVGFTKGWKLTLVILAISPVLGLSAALWAKVLSSF
TDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEDAKSLGIKKAITANISM
GIAFLLIYASYSLAFWYGTTLIIAKEYSIGQVLTVFFSVIIGAFSVGQASPSIEAFANAR
GAAYGVFKIIDSNPSIDSYSTSGHKPDNIHGNLEFKNVHFTYPSRAEVKILKGLNLKVNS
GQTVALVGNSGCGKSTTVQLIQRLYDPTEGVVTIDGQDIRSLNVRYLREITGVVSQEPVL
FATTIAENIRYGRENVTMEEIEKAVKEANAYDFIMKLPKKFDTLVGERGAQLSGGQKQRI
AIARALVRNPKILLLDEATSALDTESEAVVQEALDKAREGRTTIVIAHRLSTIRNADVIA
GFEDGVIVEQGNHNELMRQGGVYFKLVTMQTGGKQIESEGATDEETDEMSASESATQGFG
SRSLRRRSTRSSMKKQQGSEKKGTGEEETLDENVPPASFFRVLKMNKTEWPYFVVGSISA
VINGALQPSFSIIFSRIIGVFTQANSDDKRRRDSDLFSLLFLILGFISFITYFLQGFAFG
KAGEILTKRLRYKAFKAMLRQDVSWFDDPKNSTGALTTRLATDASQVKGATGARLAVITQ
NIANLGTGIIISLVYGWQLTLLLLAIVPIIAIAGIIEMKMLAGHAQKDKEELEGAGKIAT
EAIENFRTVVSLTQEKNFEYMYQQSLLGPYRNSVKKAHIFGFTFGLTQAIMYFSYAACFR
FGAYLVAHGHMDFQDVLLVFSAVVFGAMAVGQTSSLAPDYAKARVSASHIIMLLEREPLI
DSYSEEGQKLKTFEGNVSFSEVKFNYPTRPNIPVLQGLTLEVKKGQTLALVGSSGCGKST
VVQLLERFYDPLAGLVKVDNQDVKKLNVQWLRAQLGIVSQEPILFDCSIGENIAYGNNSR
VVSQEEIVNAAKAANIHPFIESLPKKYETKVGDKGTQLSGGQKQRIAIARALIRNPQILL
LDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGKIKEQGTHQ
QLLALKGIYFSLVNVQSGAKRM
NT seq 3849 nt   +upstreamnt  +downstreamnt
atgagttgggaagccggtagcaatggatcggcaggaagccccacggaagagatgatggag
ttgaaatcagacagcaaacgcaaaaaaagcaagaaaaaagaaaaagagccaactgttggt
acatttgcaatgtttcgatattctgattggctagataggttatacatggtgctgggaaca
actgcagctgtcatacatggaacaggactccctctcattatgctgatttttggggaaatg
acggatagttttgccgatatgggaaatgcaaatctaacttatacagatgtgaataattca
actgaaaatccctacgatcaactggaagagcaaatgaccacgtatgcatattattataca
gcagtgggatttggagtcctcgttgctgcctacattcaagttgcattttggaccttggct
gcaggacgacaaattaagaaaattagacaaaactttttccattcagtaatgcgccaggaa
attggttggtttgatatccatgatgttggagaactgaacactcgactagctgatgatgtc
tccaaaattaacgatggaattggagacaaaattggaatactctttcaagcactagcaaca
ttccttacaggttttatagttggatttacaaaaggctggaagctaacacttgtgattctg
gccattagtcctgtcctaggcttgtcagctgccctgtgggcaaaggtactgtcttccttt
actgataaagaattattagcatatgcaaaagctggagcagtagctgaagaggtcctagca
gcaattagaactgtaattgcttttggaggacaaaagaaagagctggaaaggtacaacaaa
aatttagaagacgctaaaagtcttgggataaaaaaagctattacagccaatatttcaatg
ggaattgccttcctcctgatatatgcctcatattcactggcattctggtatgggacaact
ttgatcattgctaaggaatactctattggacaagtactcactgtcttcttttctgtgata
attggagccttcagtgttggacaggcatcaccaagcattgaagctttcgctaatgcaaga
ggtgcagcctatggagtcttcaagataatcgatagtaatccaagtattgacagctattca
acaagtggccataaaccagataatattcatggaaacttggagttcaaaaatgttcatttc
acttacccttctcgggcagaagttaagattttgaagggcctcaatctcaaggttaacagt
ggacaaacagtagcattggttggaaacagtggctgtgggaaaagcacaactgttcagttg
atacagagattatacgatcccaccgagggtgtggtcaccatcgatggacaggatatccgg
tccctaaatgtgaggtatctgagggaaattactggagttgtgagtcaagagccagtactg
tttgcaactacaattgctgaaaatattcgctatggccgtgaaaatgtcaccatggaagag
attgagaaagctgtcaaagaagccaatgcctatgactttataatgaaacttcctaaaaaa
tttgacactctggttggagaaagaggggcccagctgagtggaggtcagaaacagaggata
gcaatcgctcgagctctggttcgtaatcccaagatccttctgcttgatgaggcaacgtca
gccttagacactgaaagtgaagcagttgtacaagaggcactggataaggcaagagaaggc
cgtaccaccattgttatagcacatcgtttgtctacaatccgtaatgcagatgtcatagct
ggctttgaggatggagtcattgtggagcaaggaaaccataatgaattaatgagacaggga
ggtgtttacttcaaacttgttaccatgcagacaggaggaaaacagattgaatcagagggt
gctacagatgaagagacagatgaaatgagtgcctcagaatcagctacacaaggttttgga
tccagaagcctaagaaggcgatcaactcgctcaagtatgaagaagcaacagggatcagag
aaaaaaggcactggagaggaggaaacgcttgatgaaaatgtgcctccagcttcttttttc
agagttctgaagatgaataagacagaatggccttattttgtggttggcagtatttctgct
gttatcaatggagctctacagccatcattttctataatattttccaggattattggggtc
tttacacaagcgaattctgatgacaaaagacggcgtgatagtgatttgttttcactgttg
tttttaatacttggatttatttctttcattacctattttcttcagggtttcgcatttggc
aaagctggagagattcttaccaagagactccgatataaggcctttaaagcaatgttgaga
caggatgtaagctggtttgatgaccctaaaaacagcaccggtgctctgactacaagactt
gctactgatgcctcccaagtcaaaggggccaccggtgctagactggctgttattacccag
aacatagccaatcttgggactggaatcatcatctcattggtttacggctggcagttaaca
ctcttgctattagccatcgtacccatcatagcaattgcgggaattattgaaatgaaaatg
ttggccggacatgcccagaaagataaggaagaattagagggtgctggaaagattgctaca
gaagcaatagaaaatttccgaactgttgtttctctgactcaggaaaaaaactttgagtat
atgtatcaacagagcttgctgggaccatacagaaattctgtgaagaaagcacatatcttt
ggcttcacttttggtctcacccaagcaataatgtatttttcctatgctgcttgtttccgg
tttggtgcctacttggtggcacatggacatatggattttcaagatgttctcttggtgttt
tcagccgttgtatttggtgctatggcagtggggcagacaagttcacttgcaccagactat
gccaaagctagagtatcagcatcccacatcatcatgctgctggaacgggaacctttgata
gacagctacagtgaggagggacagaaactgaaaacatttgaagggaatgtgtcatttagt
gaagtcaagttcaactaccctacccgacctaacattcctgtgcttcaagggctgaccctg
gaggtgaagaagggtcagaccctggctcttgtgggcagcagcggttgtgggaagagtact
gtggtgcaactccttgagagattctatgatcccctggctggactggtgaaagttgataac
caagacgtcaagaagcttaatgtccagtggctccgggctcagcttggcatcgtgtcccag
gagcccatcctgttcgactgcagcattggagagaacatcgcctatggaaacaacagccgg
gtggtgtcacaggaagagattgtgaatgcagccaaagcagctaacatccatcctttcatt
gaatcattacccaaaaaatatgaaaccaaggtgggagacaaaggaactcagctctcgggg
ggtcagaaacagcgcatcgctattgctcgagcactcatcagaaaccctcagatcctgctg
ttggatgaagctacatcagcactggatacagaaagtgaaaaggttgtccaagaggccctg
gacaaggccagagaaggtcgtacctgtattgtgattgctcaccgcctctccaccatccag
aatgctgaccttattgtggtattccagaatggcaagatcaaagaacaaggaacacaccaa
cagctgctggctctgaaaggcatctacttttcactggtcaatgttcagagtggggcaaag
cgaatgtga

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