KEGG   Trichosurus vulpecula (common brushtail): 118849943
Entry
118849943         CDS       T10126                                 
Name
(RefSeq) ATP-dependent translocase ABCB1-like isoform X1
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp02010  ABC transporters
tvp04976  Bile secretion
tvp05206  MicroRNAs in cancer
tvp05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    118849943
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    118849943
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    118849943
  09162 Cancer: specific types
   05226 Gastric cancer
    118849943
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tvp02000]
    118849943
   04147 Exosome [BR:tvp04147]
    118849943
   04090 CD molecules [BR:tvp04090]
    118849943
Enzymes [BR:tvp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     118849943
Transporters [BR:tvp02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    118849943
Exosome [BR:tvp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118849943
CD molecules [BR:tvp04090]
 Proteins
  118849943
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase AAA_22 AAA_16 Zeta_toxin Rad17 RsgA_GTPase AAA AAA_5 AAA_29 DUF815 AAA_15 AAA_30 AAA_14 G-alpha AAA_7 nSTAND3 APS_kinase AAA_19 NTPase_1 DUF4714
Other DBs
NCBI-GeneID: 118849943
NCBI-ProteinID: XP_036614945
LinkDB
Position
5:53831577..54150611
AA seq 1282 aa
MSWEAGSNGSAGSPTEEMMDSKSDSKRKKSKKKEKQPTVGTFAVFRYSDWLDRLYMVLGT
TAAVIHGAGLPLMMLIFGEMTDSFADMGNANLTSTDMNNSTENLFDQLEEQMTTYAYYYT
AVGCGVLIASYVQVAFWTLAAGRQIKKIRQNFFHSIMRQEIGWFDMHDVGELNTRLADDV
SKINDGIGDKIGILFQAIATFLTGFIVGFTRGWKLTLVILAISPVLGLSAALLAKILSSF
TDKELLAYAKAGAVAEEVLAAIRTVIAFGGQKKELERYNKNLEDAKSLGIKKAITANISM
GVAFLLIYASYSLAFWYGTTLIIAKEYSIGQVLTVFFSVIIGAFSVGQASPSIEAFANAR
GAAYGVFKIIDNNPSIDSYSTSGHKPDNIHGNLEFKNVHFTYPSRAEVKVLKGLNLKINS
GQTVALVGNSGCGKSTTVQLIQRLYDPTEGVITVDGQDIRTLNVRYLREITGVVSQEPVL
FATTIAENIRYGRENVTMEEIDKAVKEANAYDFIMKLPKKFDTLVGERGAQLSGGQKQRI
AIARALVRNPKILLLDEATSALDTESEAVVQEALDKAREGRTTIVIAHRLSTIRNADVIA
GFEDGVIVEQGNHNELMRQGGVYFKLVTMQTGGKQIESEGPTDEERDEMSASESATQGFG
SRSLRRRSTRSSIKKQQGSEKKGSGEEETLDENVPPASFFRVLKMNKTEWPYFVVGTICA
IINGALQPSFAIIFSRIIGVFTQANSDDKRRRDSDLFSLLFLILGFISFITYFLQGFTFG
KAGEILTKRLRYKAFKAMLRQDVSWFDDPKNSTGALTTRLATDASQVKGATGARLALIAQ
NVANLGTAIIIAFVYGWQLTLLVLAIVPIIAIAGIIQMKMLAGHAQKDKEELEGAGKIAT
EAIENFRTVVSLTREKKFEYMYQQSLLGPYRNSVKKAHIFGFTFGLTQAMMYFAYAACYR
FGAYLVAHGHMDFQDVLLVFSAVVFGAMAVGQTSSLAPDYAKARVSASHIIMLLEREPLI
DSYSEEGQKLKTFEGNVSFSEVKFNYPTRPNIPVLQGLTLEVKKGQTLALVGSSGCGKST
AVQLLERFYDPLDGLVKVDNQDIKKLNVQWLRAQLGIVSQEPILFDCSIGENIAYGNNSR
VVSQEEIVNAAKAANIHSFIETLPKKYETRVGDKGTQLSGGQKQRIAIARALIRNPQILL
LDEATSALDTESEKVVQEALDKAREGRTCIVIAHRLSTIQNADLIVVFQNGKIKEQGTHQ
QLLALKGIYFSLVNIQSGAKRM
NT seq 3849 nt   +upstreamnt  +downstreamnt
atgagttgggaagccggtagtaatggatcggcaggaagccccacggaagagatgatggac
tcgaaatcggatagcaaacggaaaaaaagcaagaaaaaagaaaaacagccaactgttggt
acatttgcagtgtttcgatattctgattggctggataggttatacatggtgctgggaaca
actgcagctgtcatacatggagcaggactccctctcatgatgctgatttttggggaaatg
acggatagttttgctgatatgggaaatgcaaatctaactagtacagacatgaataattca
actgaaaatctctttgatcaactggaagagcaaatgaccacgtatgcatattattatacg
gcagtgggctgtggagtcctcattgcttcctacgttcaagttgcattttggaccttggct
gcaggacgacaaattaagaaaattagacaaaactttttccattcaataatgcgccaggaa
attggttggtttgatatgcatgatgttggagaactgaacactcgactagctgatgatgtc
tccaaaattaacgatggaattggagacaaaattggaatactctttcaagcaatagcaaca
ttccttacaggttttatagttggatttacaagaggctggaagctaacgcttgtgattctg
gccattagtcctgtcctaggcttgtcagctgccctcttggcaaagatactgtcttccttt
actgataaagaattattagcatatgccaaagctggagcagtagctgaagaggtcctagca
gcaattagaactgtaattgcttttggaggacaaaagaaagagctggaaaggtacaacaaa
aatttagaagacgctaaaagtcttgggataaaaaaagctattacggccaatatttcaatg
ggagtcgccttcctcctgatatatgcctcatattccctggcattctggtatgggacaact
ttgatcatcgctaaggaatactctattggacaagtactcactgtcttcttttctgtgata
attggagccttcagtgttggacaggcatcaccaagcattgaagcttttgctaatgcaaga
ggtgcagcctatggagtcttcaagataattgataataatccaagtattgacagctattca
acaagtggccataaaccagataatattcatggaaacttggagttcaaaaatgttcatttc
acttacccttctcgggcagaagttaaggttttgaagggcctcaatctgaagattaacagt
ggacaaacagtagcattggttggaaacagtggctgtgggaaaagtacaactgttcagttg
atacagagattatacgatcccaccgagggtgtgatcaccgttgatggacaggatatccgg
accctaaatgtgaggtatctgagggaaattactggagttgtgagtcaagagccagtactg
tttgcaactacaattgctgaaaatattcgctatggccgtgaaaacgtcaccatggaagag
attgacaaagctgtcaaagaagccaatgcctatgactttataatgaaacttcctaaaaaa
tttgacactctggttggagaaagaggggcccagctgagtggaggtcagaaacagaggata
gcaatagctcgagctctggttcgtaatcccaagatccttctgcttgatgaggcaacgtca
gccttagacactgaaagtgaagcagttgtacaagaggcactggacaaggcaagagaaggc
cgtaccaccattgttatagcgcatcgtttgtctacaatccgtaatgcagatgtcatagct
ggctttgaggatggagtcattgtggagcaaggaaaccataatgaattaatgagacaggga
ggtgtttacttcaaacttgttaccatgcagacaggaggaaaacagattgaatcagagggt
cctacagatgaagagagagatgaaatgagtgcctcagaatcagctacacaaggttttgga
tccagaagcctaagaaggcgatcaactcgctcaagtatcaagaagcaacagggatcagag
aaaaaaggctctggagaggaggaaacgcttgatgaaaatgtgcctccagcttcttttttc
agagttctgaagatgaataagacagagtggccttattttgtggttggcactatttgtgct
attatcaatggagctctacaaccatcatttgctataatattttccaggattattggggtc
tttacacaagcaaattctgatgataaaagacggcgtgatagtgatttgttttcactgttg
tttttaatacttggatttatttctttcattacctattttcttcagggtttcacatttggc
aaagctggagagattcttaccaagagactccgatacaaggcctttaaagcaatgttgaga
caggatgtaagctggtttgatgaccctaaaaacagcaccggtgctctgactacaagactt
gctactgatgcctcccaagtcaaaggggccaccggtgctagactggctcttattgcccag
aatgtagccaatcttgggactgcaatcatcatcgcatttgtctatggctggcagttaaca
ctcttggtcttagccatcgtacccatcatagcaattgcgggaattattcaaatgaaaatg
ttggctggacatgcccagaaagataaggaagaattagagggtgctggaaagattgctact
gaagcaatagaaaatttccgaactgttgtttctctgactcgggagaaaaagtttgagtat
atgtatcaacagagcttgctgggaccatacagaaattctgtgaagaaagcacatatcttt
ggcttcacttttgggctcacccaagcaatgatgtattttgcctatgctgcttgttaccgg
tttggtgcctacttggtggcacatggacatatggattttcaagatgttctcttggtgttt
tcagctgttgtatttggtgctatggcagtggggcagacaagttcacttgcaccagactat
gccaaagctagagtatcagcatcccacatcatcatgctcctggaacgggaacctttgata
gacagctacagtgaggagggacagaaactgaaaacatttgaagggaacgtgtcatttagt
gaagtcaagttcaactaccctacccgacctaacattcctgtgcttcaagggctgaccctg
gaggtgaagaagggtcagaccctggctcttgtgggcagcagcggttgtgggaagagtacc
gcagtgcaactcctcgagagattctatgatcccctggatggactagtgaaagttgataac
caagacatcaagaagcttaatgtccagtggctccgggctcagcttggcattgtgtcccag
gaacccatcctgttcgactgcagcattggagagaacatcgcctatggaaacaacagccgg
gtggtgtcacaggaagagattgtgaatgcagccaaagccgccaacatccattctttcatc
gaaacattacccaaaaaatatgaaaccagggtgggagacaaaggaactcagctctcaggg
ggtcagaaacagcgcattgctattgctcgagcactcatcagaaaccctcagatcctgctg
ttggatgaagccacatcagcgctggatacagaaagtgaaaaggtcgtccaagaggccctg
gacaaggccagagaaggtcgtacctgtattgtgattgctcaccgcctctccaccatccag
aatgctgaccttattgtggtattccagaatggcaagatcaaagaacaaggaacacaccaa
cagctgctggctctgaaaggcatctacttttcactggtcaacattcagagtggggcaaag
cgaatgtga

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