Trichosurus vulpecula (common brushtail): 118850037
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Entry
118850037 CDS
T10126
Symbol
GSDME
Name
(RefSeq) gasdermin-E
KO
K22146
gasdermin-E
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
118850037 (GSDME)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvp02000
]
118850037 (GSDME)
Transporters [BR:
tvp02000
]
Other transporters
Pores ion channels [TC:
1
]
118850037 (GSDME)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gasdermin
Gasdermin_C
Motif
Other DBs
NCBI-GeneID:
118850037
NCBI-ProteinID:
XP_036615116
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All DBs
Position
5:complement(16448923..16501915)
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AA seq
503 aa
AA seq
DB search
MFAKATRNFLKDTDPGGDLIPVSSLNDSYRLQLLSLVVKKKKFWCWQRPKYQFLSATIND
ILTKDEFVNQVVVESDFVKYEGKFEDVTKGTIETALGRITLKAGRSGLVESQSSFGTLRK
HEVDLQQLIRESVDRKINLKSPLLQQVLERKNEVLCILTQKIVTTQKCVISEHVQIEDKC
GGMVGLKTKRVKVSVSENGNVMTDSNVVLEIPASTPIAYRVLELYVKRDGQFEFCLLKEK
KGGFEQESADGLDHLDAGIYGEQIFPFMPDIADGTSEAAKLVPAEGPLSSLKHGMLLLER
NFRPFVELSEHHQAALCESLWEILFDDELVVALDTVLDDIFTGGSPQLTTLTELSHLQQR
QLATFLKLAGLQVRKDLLVWRDTQSSQELLSTIHFFISALAEMPDNTPALMGTCCKLHVV
PALCYLPRVTSADGFSELGHPSLAPLNNAERFEIVQKLFALSNISLERREETVKAVIMKK
PQYLPLILYIILNGLCALEKKDK
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtttgccaaggccaccaggaattttctcaaagacactgacccaggaggggacttgatc
ccagtgtcgagcctgaatgactcatacaggttacagctcctgagtttggtggtgaagaaa
aagaagttttggtgttggcagagacccaagtaccagtttttatcagccaccatcaatgac
atcctgactaaagatgagtttgtgaaccaagttgtggtcgagtcagactttgtgaagtat
gaggggaagtttgaagatgtcacaaagggcactattgagactgccttggggaggatcact
cttaaggctggaagatcgggcttggtggagagccagtcttcctttgggacgcttcggaag
cacgaggtggacctgcagcagctcatcagggagtctgtggataggaagataaatctgaag
agtcctttgctgcagcaagtcctggagaggaagaatgaggtcctgtgcatcttgacacaa
aagatcgtgaccactcaaaagtgtgtcatctctgagcatgtccagatagaagataaatgt
ggtggcatggtgggcctcaagaccaaaagggtgaaggtctctgtgagtgaaaatgggaat
gtgatgacagactccaacgtggtcctggagatcccggcatccacccccatcgcctacagg
gtcctggagctgtatgtcaagcgggacggccagtttgaattctgcttgctgaaggagaaa
aaaggtggctttgagcaagagagtgcagatggcctcgatcacctggatgctgggatctat
ggagagcaaatcttccccttcatgccagacattgcggatgggacttctgaggctgcaaag
ctcgtgcctgctgaggggccattaagctccttaaaacacgggatgctgctcttggagagg
aatttccgtccctttgtggagctgtcagagcatcaccaagcagctctgtgtgaaagcctc
tgggaaatcctgttcgacgatgaattggtggtggccctggacaccgtgcttgatgacatc
tttacgggcggaagcccgcagctgacgacactcacagagctgagccatcttcagcaacgg
cagctcgctaccttcctgaagctggcaggactccaagtgcggaaggatctgctggtgtgg
cgggacactcagagcagtcaggagctgctgtccaccatccacttctttatcagtgctctg
gcagagatgccagacaacacgccagccctgatgggcacttgctgcaagctacatgtggta
ccggcattgtgttacttgcctcgagtaacatctgctgatggcttttctgaacttggacac
ccgagcctggcccctctcaacaacgcagaaagatttgagattgtgcagaagttgtttgct
ctatcaaacatcagcctggaacgaagggaggagactgtgaaggcagtcattatgaagaag
cctcagtatctccccctcattctttatataatcctgaatggactttgtgctttagaaaaa
aaagacaagtga
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