KEGG   Trichosurus vulpecula (common brushtail): 118850050
Entry
118850050         CDS       T10126                                 
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent translocase ABCB1-like
  KO
K05658  ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:7.6.2.2]
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp02010  ABC transporters
tvp04976  Bile secretion
tvp05206  MicroRNAs in cancer
tvp05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    118850050
 09150 Organismal Systems
  09154 Digestive system
   04976 Bile secretion
    118850050
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    118850050
  09162 Cancer: specific types
   05226 Gastric cancer
    118850050
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:tvp02000]
    118850050
   04147 Exosome [BR:tvp04147]
    118850050
   04090 CD molecules [BR:tvp04090]
    118850050
Enzymes [BR:tvp01000]
 7. Translocases
  7.6  Catalysing the translocation of other compounds
   7.6.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.6.2.2  ABC-type xenobiotic transporter
     118850050
Transporters [BR:tvp02000]
 ABC transporters, eukaryotic type
  ABCB (MDR/TAP) subfamily
   ABCB1, 4, 5 subgroups
    118850050
Exosome [BR:tvp04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118850050
CD molecules [BR:tvp04090]
 Proteins
  118850050
SSDB
Motif
Pfam: ABC_membrane ABC_tran SMC_N ABC_ATPase Zeta_toxin AAA_16 AAA AAA_22 AAA_5 RsgA_GTPase NTPase_1 AAA_14 DUF2336 DUF87 G-alpha SbcC_Walker_B AAA_29 APS_kinase Rad17 AAA_19 AAA_7 DUF815 nSTAND3
Other DBs
NCBI-GeneID: 118850050
NCBI-ProteinID: XP_036615146
LinkDB
Position
5:54038794..54100833
AA seq 886 aa
MTDLKSYSKRKKSKKKEKQPTVGTFAMFRYSDWLDRLYMVLGTTAAVIHGAAQPLIMLIF
GEMTDSFANMGNANLTNTDVNKSTENPYNQLEEQMTMYAYYYSAVGFGVLVAAYIQVAFW
TLAAGXQIKKIRQNFFHSIMRQEIGWFDIHDVGELNTRLADDVSKINDGIGDKIGILFQA
IATFLTGFIVGFTRGWKLTLVILAISPLLGLSAALWAKILSSFTDKELLAYAKAGAVAEE
VLAAIRTVIAFGGQKKELERYNKNLEDAKSLGIKKAITANMSIGVAFFLIYASYSLAFWY
GTTLIIANEYSIGQVLTVFFSVTIGVFSVGQASPSIEAFANARGAAYGVFKIIDNNPIID
SYSTSGHKPDNIHGILEFKNVHFTYPSRAEVKILKGLNLKVNSGQTVALVGNSGCGKSTT
VQLIQRLYDPTEGVVTIDGQDIRTLNVRYLREITGVVSQEPVLFATTIAENIRYGHENVT
MEEIEKAVKEANAYDFIMKLPKKFDTLVGERGAQLSGGQKQRIAIARALVRNPKILLLDE
ATSALDTESEAVVQEALDKAREGRTTIVIAHRLSTIRNADVIAGFEDGVIVEQGNHNELM
RQGGVYFKLVTMQTGGKQIESEGATDEETDEMSASESATQGFGSRSLRRRSTHSSMKKQQ
GSEKKVTGEEETLDENVPPASFFRVLKMNKTEWPYFVVGTICAIINGALQPSFAIIFSRI
IGVFTQANSDDKRRRDDDLFSLLFXYLDCIVFITYFLQGFAVGKAGEILTKRLRYKAFKA
MLRQDVSWFDDPKNSTGALTTRLATDASQVKGATGARLAVITQNVANLGTGIISFVYGWQ
LTLLVLAIVPIMAIAGIIQMKMLAGHAQKDKEELEGAGKVSPTHRL
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgacggacttgaaatcatacagcaaacgcaaaaaaagcaagaaaaaagaaaaacagcca
actgttggtacatttgcaatgtttcgatattctgattggctggataggttatacatggtg
ctgggaacaactgcagctgtcatacatggagcagcacaacctctgatcatgctgattttt
ggggaaatgacagatagttttgccaatatgggaaatgcaaatctaactaatacagatgtg
aataagtcaactgaaaatccctacaatcaactggaagagcaaatgaccatgtatgcatat
tattattcggcagtgggatttggagtcctcgttgctgcctacattcaagttgcattttgg
accttggctgcaggatgacaaattaagaaaattagacaaaattttttccattcaataatg
cgccaggaaattggttggtttgatatccatgatgttggggaactgaacactcgactagct
gatgatgtgtccaaaattaacgatggaattggagacaaaattggaatactctttcaagca
atagcaacattccttacaggttttatagttggatttacaagaggctggaagctaacactt
gtgattctggccattagtcctctcctaggcttgtcagctgccctctgggcaaagatactg
tcttcctttactgataaagaattattagcatatgcaaaagctggagcagtagctgaagag
gtcctagcagcaattagaactgtaattgcttttggaggacaaaagaaagaactggaaagg
tacaacaaaaatttagaagacgctaaaagtcttgggataaaaaaagctattacagccaat
atgtcaattggagttgccttcttcctgatatatgcctcatattccctggcattctggtat
gggacaactttgatcatcgctaatgaatactctattggacaagtactcactgtcttcttt
tctgtgacaattggagtcttcagtgttggacaggcatcaccaagcattgaagctttcgct
aatgcaagaggtgcagcctatggagtctttaagataattgataataatccaattattgac
agctattcaacaagtggccataaaccagataatattcatggaatcttggagtttaaaaac
gttcatttcacttacccttctcgggcagaagttaagattttgaagggcctcaatctcaag
gttaacagtggacaaacagtagcattggttggaaacagtggctgtgggaaaagtacaact
gttcagttgatacagagattatatgatcccaccgagggtgtggtcaccatcgatggacag
gatatccggaccctaaatgtaaggtatctgagggaaattactggagttgtgagtcaagag
ccagtactgtttgcaactacaattgctgaaaatattcgctatggccatgaaaatgtcacc
atggaagagattgagaaagctgtcaaagaagccaatgcctatgactttataatgaaactt
cctaaaaaatttgacactttggttggagaaagaggggcccagctgagtggaggtcagaaa
cagaggatagcaatcgctcgagctctggttcgtaatcccaagatccttctgcttgatgag
gcaacgtcagccttagacactgaaagtgaagcagttgtacaagaggcactggataaggca
agagaaggccgtactaccattgttatagcacatcgtttgtctacaatccgtaatgcagat
gtcatagctggctttgaggatggagtcattgtggagcaaggaaaccataatgaattaatg
agacagggaggtgtttacttcaaacttgttaccatgcagacaggaggaaaacagattgaa
tcagagggtgctacagatgaagagacagatgaaatgagtgcctcagaatcagctacacaa
ggttttggatccagaagcctaagaaggcgatcaactcactcaagtatgaagaagcaacag
ggatcagagaaaaaagtcactggagaggaggaaacgcttgatgaaaatgtgcctccagct
tcttttttcagagttctgaagatgaataagacagagtggccttattttgtggttggcact
atttgtgccattatcaatggagctctacagccatcatttgctataatattttccaggatt
attggggtctttacacaagcgaattctgatgacaaaagacggcgtgatgatgatttgttt
tcactgttgttttagtacttggattgtattgtcttcattacctattttcttcagggtttc
gcagttggcaaagctggagagattcttaccaagagactccgatataaggcctttaaagca
atgttgagacaggatgtaagctggtttgatgatcctaaaaacagcaccggtgctctgact
acaagacttgctactgatgcctcccaagtcaagggggccaccggtgctagactggctgtt
attacccagaatgtagccaatcttgggactggaatcatctcatttgtctatggctggcag
ttaacactcttggtcttagccatcgtacccatcatggcaattgcgggaattattcaaatg
aaaatgttggccggacatgcccagaaagataaggaagaattagagggtgctggaaaggtc
agtccaactcataggctctga

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