Trichosurus vulpecula (common brushtail): 118850196
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Entry
118850196 CDS
T10126
Symbol
ZEB1
Name
(RefSeq) zinc finger E-box-binding homeobox 1 isoform X1
KO
K09299
zinc finger homeobox protein 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp05202
Transcriptional misregulation in cancer
tvp05206
MicroRNAs in cancer
tvp05215
Prostate cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
118850196 (ZEB1)
05206 MicroRNAs in cancer
118850196 (ZEB1)
09162 Cancer: specific types
05215 Prostate cancer
118850196 (ZEB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118850196 (ZEB1)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
118850196 (ZEB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
zf-C2H2_6
Zf-C2H2_ZNF451_C
Zn_SUZ12
zf-C2HE
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
118850196
NCBI-ProteinID:
XP_036615317
LinkDB
All DBs
Position
5:70662429..70873090
Genome browser
AA seq
1127 aa
AA seq
DB search
MADGPRCKRRKQANPRRNNVTNYNNVVETNSDSDDEDKLHIVEEESVTDAGDCDASVPED
DLPTDQTVLPESHEQEGSASSCWEDDGKEGKEILGPDAQADEAGCAVKEDECDSDAENEQ
NHDPNVEEFLQQEDTAVIYPEAPEEDQRQGTPEASGHDENGTPDAFSQLLTCPYCDRGYK
RFTSLKEHIKYRHEKNEDNFSCSLCSYTFAYRTQLERHMTSHKSGRDQRHVTQSGGNRKF
KCTECGKAFKYKHHLKEHLRIHSGEKPYECPNCKKRFSHSGSYSSHISSKKCIGLMPVNG
RSRSGLKPSQCSSPSLSASPGSPARPQIRQKIENKPLQEQLPVNQIKTEPVDYEFKPIVV
TSGINCSAPLQNGVFSGGSPLQATSSPQGVVQAVVLPTVGLVSPISINLSDIQNVLKVAV
DGNVIRQVLENNHANLASKDQETISSPTIQSGGHSLISAISLPLVDQDGTTKIIINYSLE
QPGQLQVVPQNLKKESSAPTNSCKSEKLPEDLTVKSEKDKHFEGGADDSTCLLCEDCPGD
LNALPELKHYDPKQPAPPAQPSAPEAEKSEPPAPADPGEGRLSPSQPPLKNLLSLLKAYY
ALNAQPSAEELSKIADSVNLPLEVVKKWFEKMQAGQISVQSSEPSSPEPGKGNVPADDGD
PPGPANTDEPQDSTTPSESPSKVTKSPVLPAGSALNSSRSRTPSPSPLNLSSSRNTQGYL
YTAEGAPEEPQVEPLDLSLPKQHGELLERSTITSVYQNSVYSVQEEPLNLSCAKKDPLPK
DSCVTDSDPVVNVIPPSANPINIAIPTVTAQLPTIVAITDQNSVPCLRALAANKQTILIP
QVAYTYSTTVSPAVQEAPAKVTQPNGNQDERQDTSSEGVSNVEDQNDSDSTPPKKKMRKT
ENGMYACDLCDKIFQKSSSLLRHKYEHTGKRPHECGICKKAFKHKHHLIEHMRLHSGEKP
YQCDKCGKRFSHSGSYSQHMNHRYSYCKREAEERDGTEQEETGSEALTHEHADTRASPSQ
MDSDERESLTREEDEDSEKEEEEEEEKEIEELQEEKECGKPQEEEEEDGEEEEEEEEEDG
DEEEEEGGGANTEGTRKDEEAVDQAHSVEQEITENGEQGSKEKTNEA
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaagcaggcgaacccgcggcgcaataacgtt
acaaattataataatgtggtagaaacaaattcggattcagatgatgaagacaaactacat
attgtggaagaagaaagtgttactgatgcaggggattgtgatgctagtgtgccagaagat
gatttgccaacagaccagacagtgttaccagaaagccatgaacaggaaggaagtgccagc
agttgctgggaagatgatggaaaggaaggaaaagaaatcctggggcctgacgctcaggca
gatgaagctggatgcgcagtaaaagaggatgaatgtgactcagatgcagaaaacgaacaa
aaccatgatcctaatgttgaagaattcctgcaacaagaagatacagctgttatctatcct
gaagcacctgaggaagaccagagacaaggcacccccgaagctagtggtcatgatgaaaat
ggaacacctgatgcattttctcagctcctcacctgcccatattgtgaccgaggctacaaa
cgctttacctccctgaaggaacacattaaatatcgccatgaaaaaaatgaggacaacttt
agttgttccctgtgcagttacacgtttgcatacagaacacaacttgagcgtcacatgacg
tcccataaatcaggaagagatcaaagacatgtgacccaatctgggggtaacaggaaattc
aagtgcacagaatgtggaaaagctttcaagtacaaacaccaccttaaggagcacttgagg
atccacagcggagagaagccatatgaatgcccaaactgcaagaaacgtttttcccattct
ggttcctatagctcacacatcagcagtaaaaaatgcatcggtttgatgcctgtgaatggc
cggtcaagatccgggctcaagccctcacagtgctcctccccttctctgtcggcatcaccg
ggcagtcctgcgaggcctcagatacggcagaagattgaaaacaagcccctgcaagaacaa
cttccagtaaaccaaattaaaacggaacctgtggattatgaattcaaacccatcgtggtt
acttcaggaatcaactgttcagccccgttacagaatggggttttcagtggcggtagcccc
ttacaagctaccagttctcctcagggtgtggtgcaagctgttgtcctcccaacagtaggt
ttggtgtctcccataagtattaacttgagtgatattcagaatgtactcaaagtggcagta
gatggtaatgtaatacggcaagttttggagaacaatcatgccaaccttgcatccaaagat
caagaaacaatcagctcgccaaccatacagtcaggtggccattccctcatttccgctatc
agtcttcctttggttgaccaggatggaacaaccaaaatcatcatcaactatagccttgaa
cagcctggtcagcttcaggtggttccccagaatctgaaaaaggaaagctcagcccccacc
aatagttgcaaaagtgaaaagttgccggaagaccttacagtgaagtctgagaaggataag
cactttgaagggggcgccgatgacagcacttgccttctgtgcgaggactgcccaggagat
ctgaacgcacttccagagctaaagcactatgacccaaagcagcctgctccgcctgctcag
cccagtgcccccgaagctgagaagtccgagccccctgccccggcagaccccggagagggc
cgcctgtctcccagtcagccacccctaaaaaacctcctgtccctcctcaaagcgtactac
gctctaaatgcacagccgagcgcagaagagctttccaaaatcgcagactcggtaaacctg
cccttggaggtcgtgaaaaagtggtttgaaaagatgcaagctggacagatttcagtgcag
tcttcggagccgtcctcccccgaaccaggcaaagggaacgttcccgccgatgacggtgat
ccgccaggacccgccaacaccgacgaaccccaggacagcaccacgccttcagagagtccc
agcaaggtgacaaagtctcccgttttgccggcggggtcagctctgaacagctccagaagt
cgcacaccatccccatcgccactcaacctttcttcatcccgaaacacacagggttacttg
tacacggcagaaggggcccctgaagagccacaagtcgaacctcttgatctttcactacca
aagcaacatggagaattgttggagagatccaccatcactagtgtttaccagaacagtgtt
tattctgtccaggaagagcccttgaacttgtcatgtgcaaaaaaggatccgctgccgaag
gacagttgtgtgacagactcagacccagttgtaaatgtgatcccaccaagtgccaacccc
ataaatatcgccatccccaccgtcactgcccagctgcccacaatcgttgccatcactgac
cagaacagtgttccgtgcttacgagcactcgctgccaataagcagaccatcctgattccc
caggtggcatatacgtattccactacggtcagccctgcagtccaagaagcgcctgcaaag
gtgacccagcctaatggaaatcaggatgaaaggcaagacactagctcagaaggagtatca
aatgtggaggatcagaatgattctgattctacaccaccaaaaaagaaaatgcggaagaca
gaaaatggaatgtatgcctgtgatttgtgtgataagatattccagaaaagcagttcacta
ttaagacataaatatgaacatacaggtaaacgacctcatgagtgcggaatctgcaaaaag
gcatttaaacacaaacatcatttaatcgaacacatgcgactgcattctggtgaaaagcct
tatcaatgtgacaaatgtggaaaacgtttttcacactcggggtcttattcacaacacatg
aatcatcgctactcctattgcaagagagaagcggaggaacgcgacggcacagaacaggaa
gagacgggatcggaagccctgactcacgagcatgctgataccagggcatctccctcccag
atggactcggatgagagagagagcttaacaagagaagaggatgaagacagtgaaaaagaa
gaagaggaagaggaggaaaaagagatagaggaacttcaggaagaaaaagaatgtggaaaa
ccacaagaggaggaggaagaggatggggaagaagaagaggaggaggaggaagaggatggg
gacgaagaggaggaggagggaggaggagcaaacactgaaggtaccaggaaggatgaagag
gccgtagatcaagctcacagtgtagaacaagaaatcacagagaatggtgaacaaggatca
aaagagaaaacaaatgaagcctaa
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integrated database retrieval system
