Trichosurus vulpecula (common brushtail): 118850218
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Entry
118850218 CDS
T10126
Symbol
PPFIBP1
Name
(RefSeq) liprin-beta-1 isoform X1
KO
K27096
liprin-beta
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118850218 (PPFIBP1)
Membrane trafficking [BR:
tvp04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118850218 (PPFIBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
DUF16
PUMA_CC
DUF4407
Motif
Other DBs
NCBI-GeneID:
118850218
NCBI-ProteinID:
XP_036615353
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All DBs
Position
5:279487086..279564365
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AA seq
1034 aa
AA seq
DB search
MMSDASDMLAAALEQMDGIIAGSKALEYSNGIFDCQSPTSPFMGSLRALHLVEDLRGLLE
MMETDEKEGLRCQVPDSTAETLIEWLQSQMTNGRISGNGDVYQERLARLENDKESLVLQV
SVLTDQVEAQGEKIRDLEFCLEEHREKLNATEEMLQQELLSRTSLETQKLDLMAEVSNLK
LKLTSVEKDRLDYEDRFRDTEGLMQEINDLRLRVGEMDSERLQYEKKLKSTKSLMAKLSS
MKIKVGQTQYEKQRLEQKCQTLKDELTSLKEQLEEKESEVKRLQEKLVCKMKGEGIEVID
RDENCKKKLKEKNIEVQKMKKSMESLMAANEEKDRKIEDLRQCLSRYKKVQDMVILSQGK
KGKEGEYEELPSSVSALLEMQSVSDLEKSPPSTPATGSPSHDVLNTSVPEELHMSILQVS
MPSFSPISKDLETSDKSKSPSKSETSADVNDGKTILDSALEVQMCDNLLSSTLQKSSSLG
NLKKEVSEMEQEPLQKPPETEPPVQISKFGSLPPKVQGPGPSADDNAFGTRKARSSFGRG
FFKIKNNKRTASAPNLDRSRSASAPTLAETEKETAEDPALAGLSSLGKDAECTSPFQLSP
PSPDSKKKSRGIMKLFGKLRRSQSTTFNPDDMSEPEFKRGGTRATAGPRLGWSRDLGQSN
SDLDTPFAKWTKEQVCNWLLDQGLGSYMNSGKHWIASGQTLLQASQQDLEKELGIKHSLH
RKKLQLALQALGSEEETNHGKLDFNWVTRWLDDIGLPQYKTQFDEGRVDGRMLHYMTVDD
LLSLKVVSVLHHLSIKRAIQVLRINNFEPNCLRRRPSDESNITPSEVSQWTNHRVMEWLR
SVDLAEYAPNLRGSGVHGGLMVLEPRFNVETMAQLLNIPPNKTLLRRHLATHFNLLIGVE
AQRQKREAMESPDYVLLTATAKVKPKKLTFSNFGNLRKKKQEDMEEYICPMELGQASRNA
AKKGYSPGLDMRLYDDDDLDRLEQMEDSEGTVRQIGAFSEGINNLTHMLKEDDMFKDFAT
RSPSASITDEDSNV
NT seq
3105 nt
NT seq
+upstream
nt +downstream
nt
atgatgagtgatgccagcgatatgctggcagctgctttggagcagatggatggtatcata
gcaggttccaaggccctggaatattccaatgggatttttgattgtcagtctccaacctcc
ccattcatggggagcttgcgagccttgcatctggtagaagatcttcgtggcttattagag
atgatggaaacggatgagaaggaaggattgagatgtcaagtccctgactcaacagcagaa
actctgattgaatggcttcagagtcaaatgactaatggacgtatatctggaaatggagat
gtatatcaggaaaggctagcacgtttagaaaatgataaagaatctctggttctccaggta
agcgtattaacagatcaagtggaagctcagggagaaaagattcgtgatttggagttttgt
cttgaagagcacagggagaaattaaatgctacagaagaaatgttacagcaggaacttctg
agtagaacatctctagaaactcagaaattggacctcatggcagaagtatctaacttaaag
ctaaaattgacttctgtagaaaaggacagattagactatgaagataggttcagagacaca
gagggtctaatgcaggaaattaatgatttgagattaagagttggtgaaatggacagtgag
agacttcaatatgagaaaaagctgaaatctaccaaatctttaatggccaaactttctagc
atgaaaatcaaggtggggcagacgcagtatgaaaagcagcggctggaacaaaaatgccag
acattaaaggatgaacttacatctttaaaagaacagctggaagaaaaagaatctgaagta
aaaagattacaagaaaaactggtttgcaaaatgaaaggagaaggaattgaagtgattgat
agagatgaaaactgtaaaaagaagctcaaagaaaaaaatattgaagtacagaaaatgaaa
aaatccatggagtccctgatggcagcaaatgaggaaaaggatcgaaaaattgaagatctt
agacagtgtttgagcagatacaagaaagtacaggatatggttatactgtctcaaggaaaa
aaaggcaaagaaggtgaatatgaagaattacctagctcagtgtcagccttgctggaaatg
cagagcgtcagtgatctggagaaaagtccaccttctactccagctacaggatctcccagc
catgatgttttgaacacaagtgttcctgaagagctccacatgagcatcttacaagtttcg
atgccttcgttttcaccaatatccaaagacttggaaacatctgacaagtccaaatctcca
tccaaatcagagacttcagctgatgtgaatgacggaaaaacaattcttgactctgcttta
gaagtgcaaatgtgtgataatctgttatcttcaactctgcaaaaatctagcagtctgggc
aatttgaagaaagaagtatctgaaatggaacaggagcctcttcagaagcctccagagaca
gaacctcctgtgcaaataagcaaatttggaagcctccctcccaaagtccaaggacctggc
ccttcagcagatgacaatgcctttggcactcggaaagcccgatcctcctttggacggggc
ttttttaagattaaaaacaacaagaggacagcaagtgcaccaaacctggatcgtagccga
agtgcaagtgcacctacgttagctgaaacagaaaaggaaactgctgaggacccagctctg
gctggcttatcttccctaggaaaggatgcagagtgcaccagtcccttccagttatctcca
ccttctccagactccaaaaagaaatccaggggtatcatgaagttatttgggaaacttagg
aggagccagtctacaactttcaatccagacgatatgtctgagcccgagttcaaaagagga
ggaacaagagcaactgctggaccccgtctgggttggtctagagacctaggacaatccaac
agtgacttggatacaccatttgccaaatggacaaaggagcaggtttgcaactggctcctg
gatcaaggattaggttcatatatgaattcaggcaaacactggattgcatctgggcaaact
ctcttacaggcttctcagcaagatctagaaaaggaactaggaattaaacattcacttcat
cgaaagaagctacagctagctctacaagccctgggatctgaagaggaaactaatcatgga
aagctggatttcaactgggttaccaggtggttggatgacattggtcttccccaatataag
actcagtttgatgaaggaagggtagatggtcggatgctacattatatgactgttgatgat
ttgttgtcattgaaggttgttagtgtgttacaccatcttagtatcaaaagagccatccag
gtgctaaggataaataactttgaacccaactgtctacggaggcgaccatcagatgagagt
aatatcactccctcagaagtttcccaatggaccaatcatcgagtgatggaatggcttcgt
tctgtagatttggcagagtatgcaccaaatttgagagggagtggtgtgcatggtggactc
atggttctggagcctcgttttaatgttgaaacaatggctcagttgttaaacattccacca
aacaaaacactgttaagacgacatttggccactcatttcaacttattgattggtgttgag
gctcaacgtcagaagcgtgaggcgatggagtcgccagattatgtacttctaacagctacc
gccaaagtgaaaccaaaaaaactcaccttcagcaattttgggaatctaagaaaaaagaaa
caagaagatatggaggaatatatatgccctatggaactgggacaggcatcaagaaatgca
gccaagaaaggttatagtcctggtttggacatgcgtctatatgatgatgacgatttggac
agactagaacagatggaagactcagaaggaacagtaaggcaaattggggcattttcagaa
ggcatcaacaatttaacacacatgttaaaagaagatgacatgtttaaagactttgccaca
cgttctcctagtgctagtattacggacgaagactccaatgtgtga
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