Trichosurus vulpecula (common brushtail): 118850224
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Entry
118850224 CDS
T10126
Symbol
CNTN1
Name
(RefSeq) contactin-1 isoform X1
KO
K06759
contactin 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04514
Cell adhesion molecule (CAM) interaction
tvp04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
118850224 (CNTN1)
04517 IgSF CAM signaling
118850224 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvp04515
]
118850224 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tvp00537
]
118850224 (CNTN1)
Cell adhesion molecules [BR:
tvp04515
]
Immunoglobulin superfamily
Contactins
118850224 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
tvp00537
]
Others
118850224 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
fn3_SORL1
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
118850224
NCBI-ProteinID:
XP_036615364
LinkDB
All DBs
Position
5:284572627..284881102
Genome browser
AA seq
1026 aa
AA seq
DB search
MTKVNEALLELNLSTVAYKMKMWFLISYLITMCFISCLAVAEDGKGFGPIFEEQPIDTIY
PEESPDGKVSLNCRARASPFPVYKWRMNNWDIDLTNDRYSMVGGNLVINNPDKLRDAGKY
FCLASNIYGMVRSTEATLSFGYLDPFPPEERVEVKVKEGIGLVLLCDPPYHFPDDLSYRW
LLNEFPIFITMDKRRYVSQTNGNLYIANVEGSDRGNYSCFVSSPSITKSVFSKFIPLIPL
SDRTTKLYPADIKVQFKDTYALVGHNVTLECFALGNPVPEIRWRKVLEPMPSTAEISMSG
AVLKIFNIQLEDEGTYECEAENIRGKDRHQARIYVQAFPEWVEHINDTEADIGSDLYWPC
VATGKPIPTIRWLRNGYAYHKGELRLYGLTFDNAGMYQCIAENAHGAIYANAELKILAMA
PTFEMNPMKKKTLAAKGGRVLIECKPKAAPKPKFSWSKGTEWLVNSTRILIWDDGSLEIR
NITRADEGTYTCFAENNRGKANNTGTLLITDATRITLPPANADVTVGENATMQCSASHDP
ALDLTFIWSLNGYVIDFNKESSHYMRNFMIDSNGDLLIKNAQLKHAGRYTCTAQTIVDNS
SASADLVVRGPPGPPGGVRIEDIRDTSVGLTWSRGSDNHSPISKYSIQTKTILSDDWKDA
KTDPPNIEGNMESARAVDLIPWMEYEFRVVATNILGTGEPSLPSNRIKTEGAAPNVAPSD
VGGGGGSNRELTITWVPLSREYHYGNNFGYIVAFKPFGGKEWKKVTVTNPDIGRYVHKDE
TMSPSTEFQVKVKAFNSKGDGPFSLTAVIYSAQDAPSEAPTDVSIKVLSSSEISVSWKHV
LEKTVEGYQIRYWAAQDKEAAAQRVQVSSQDYSAKLENLLPDMQYSVEVRAYNSAGYGPP
SDVVDVYTKKAPPSQPPRIISSVRSGSRYIITWDHVRAMSNESTVTGYKVLYRPDGEHEG
KLYSTHKHSIEVPVPRDGEYIVEVRAHSDGGDGVVSQIKISGASEISPSLFGLLLPAFGI
LAFWEF
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagttaatgaagctcttttggagttaaacctaagcactgttgcatacaagatg
aagatgtggtttttgatcagttacctaattacaatgtgcttcatatcctgtctagcagtt
gctgaagatggcaaaggatttggaccaatttttgaagagcaaccaattgataccatttat
ccagaagaatcaccagatggaaaagtatcattgaactgccgggctcgagctagccccttt
cctgtttacaaatggcgaatgaataactgggatattgatctgacaaacgatcgctacagc
atggtaggagggaacctggtaatcaacaaccctgacaaactgagagatgctggaaagtat
ttctgcttagcttcaaatatttatggaatggttagaagcactgaagcaactttaagtttt
gggtatcttgacccttttccaccagaggaacgagtggaggtaaaagtgaaggaagggata
ggccttgttcttctgtgtgatcctccttaccactttccagatgatcttagctatcgttgg
cttctaaatgagtttcctatattcatcacaatggacaaacgacgatatgtatctcagacc
aatggaaatctatatattgcaaatgtagagggatctgatagaggcaattattcatgcttt
gtatcaagtccttcaattacaaagagtgtattcagcaaatttatcccactcatccctctt
tctgaccgcacaacaaagctgtatcctgctgatatcaaagtccagttcaaggacacatat
gcactggtgggccataatgtaacattagagtgttttgcccttggaaaccctgttcctgag
atccggtggagaaaagttctggaaccaatgccaagcacagctgagattagtatgtctggt
gctgttcttaagattttcaacattcagcttgaagatgaaggaacttatgaatgtgaagct
gagaacatcagaggaaaagatagacatcaggcaagaatttatgtccaagcatttcctgaa
tgggtagaacatatcaatgacacagaggcagatataggcagtgatctatactggccttgt
gtggctacagggaaacctattcctacaatcagatggttgagaaatggatatgcgtaccat
aaaggtgagctgagactgtatgggctgacctttgataatgctggaatgtaccagtgcata
gctgaaaatgcccatggagcaatatatgcgaatgctgagctcaagattctggccatggct
cccacctttgaaatgaatcctatgaagaagaagaccctggcagctaaaggaggacgtgtt
ttaattgaatgcaaacctaaggctgcacctaaaccaaaattttcatggagtaaaggaaca
gaatggcttgtcaatagtactcgaattctcatttgggatgatggtagccttgaaatcagg
aacatcacaagggctgatgaaggcacttacacatgttttgcagaaaataacagaggaaaa
gctaataatactggaactctactaatcacagatgccacaaggattactttacccccagct
aatgctgatgtgactgtgggtgagaatgctaccatgcagtgttctgcgtcccatgatcct
gcactggacctcacatttatttggtctttgaatggatatgtgattgattttaataaagaa
agtagtcattacatgaggaattttatgatagattccaatggtgacttgcttattaaaaat
gcccagctgaaacatgctggacgttatacttgcactgctcagacaattgtggataattct
tctgcttctgctgaccttgttgttcgaggcccaccaggcccaccagggggtgtgagaata
gaagacattagagatacttctgtaggactcacatggagccgtggctcagataatcatagt
ccaatatctaaatattctattcagaccaaaactattctttctgatgactggaaagatgcc
aaaacagatccaccaaatattgaagggaatatggaatcagcaagggcagtagacctaatc
ccatggatggagtatgaattccgggtagtagcaaccaatatcttgggaacaggagagccc
agtctaccatcaaacagaatcaaaacagagggtgctgcacctaatgtggctccttcagat
gtaggaggaggaggtggaagcaaccgtgaattgacaataacatgggtgcctttgtcacga
gaataccactatggcaacaattttggttacatagtcgccttcaaaccctttggtggaaaa
gagtggaaaaaagtaacagttactaatccagatattggccggtatgttcataaagatgaa
acaatgtccccttccactgagtttcaagtaaaagtgaaagcctttaacagcaaaggagat
ggaccatttagtcttaccgcagtcatttattctgcacaagatgcacccagtgaagctcct
acagatgtgagcataaaagtcctatcttcttctgaaatctcagtttcttggaaacatgtt
ttagaaaaaaccgtggagggctatcagattcgctactgggctgcacaggataaggaagct
gctgcgcagagagttcaagtcagcagtcaggattattctgccaagctggaaaacctgctg
cctgatatgcagtattctgtggaggttagggcctataacagtgcaggatatgggccgccc
agtgatgtggttgatgtctatacaaagaaagcacccccaagtcagcctccaaggattatt
agttcagtaaggtctggttcaaggtacattatcacctgggatcatgtcagagcaatgtca
aatgaatctacagtaacaggatataaagtgctctacagacctgatggtgaacatgagggc
aagttatattcaactcataagcattcaatagaggtcccagtccccagagatggagagtat
attgtggaagttcgagcccatagtgatggaggagatggagtggtatcacaaattaaaatt
tcaggtgcatctgaaatttcgcctagtctctttggcttattgctgcctgccttcggcatc
ctagctttttgggaattctaa
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