Trichosurus vulpecula (common brushtail): 118850411
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Entry
118850411 CDS
T10126
Symbol
LIMD1
Name
(RefSeq) LIM domain-containing protein 1
KO
K16682
LIM domain-containing protein
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04390
Hippo signaling pathway
tvp04392
Hippo signaling pathway - multiple species
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04390 Hippo signaling pathway
118850411 (LIMD1)
04392 Hippo signaling pathway - multiple species
118850411 (LIMD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118850411 (LIMD1)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118850411 (LIMD1)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118850411 (LIMD1)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
118850411 (LIMD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
118850411
NCBI-ProteinID:
XP_036615678
LinkDB
All DBs
Position
5:complement(43148638..43222284)
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AA seq
710 aa
AA seq
DB search
MEKYEDLGLEASKFIEDLNMYEASKDGLFRVDKGAGNNPEFEETRRVFASKMAKIHLQKQ
QQLLQEDLLQGASGSLNGGGRLAPQIPATGPFTHREAGGSSKLALGDGAAKPPLAAPALA
SGAGPGATGPVSQLAFPSQSHSSLPQGQRARLQPEGQKRASQDFSYGNGTGNSSASGLQG
LDSRGTSGIGPTQGAFSSLSHGDYYDNYPEQKWAEEPSQFTSIRPSMGNSWPGSKTPTDP
HLYQCQPSPNSCRSFESGYSSQDGSGSEGHQLSRDSEQKPTGQQRSSSFSHTLNSRAPPA
APEIATPLALPQHRSSSFSAPATLAASGTSLQGDPSKKSAGMERDVPGGMAKPTGDSQLW
YHGSPKSYISSSVPAPLPTSIDYQPSGSAYPKSIDHLVPHGQTPQPNCRDSGTNPKLGFP
NLSSGPASDAPGPSFREGPNSLPPDSSQGSVHPENSSSTKVKLPCQTLLPLPEQGLSAVE
LKLEALTQRLEQEMDIHPKEDYFGACVKCNKGVFGANQACQAMGNLYHDSCFTCGACSRK
LRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFVCGHLIMDMILQALGKSYHPGCFRCVIC
NECLDGVPFTVDTENKIYCVRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYHVE
CYHCEDCGMELNDEDGHRCYPLEDHLLCHACHLKHIEKGATSVATHQHPY
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggagaagtacgaagacttgggccttgaggccagtaaatttattgaggacctcaacatg
tacgaggcatctaaggatggtctgttccgagtggacaagggagcaggcaacaacccggag
tttgaagagacccggagggtgtttgcctccaagatggctaagatccaccttcagaagcaa
cagcagctgctacaggaggacctgctgcagggggctagtggctccctcaatggaggtggc
cggctagccccccagatccctgctacaggacccttcacccaccgggaagcaggggggagc
agtaagctagccctgggggatggagctgccaaaccccctcttgctgcaccagccttggca
tctggggctgggcccggagcaacaggccctgtgagtcagctggcctttccaagtcagtca
cactcatctctgcctcagggtcagcgggccaggttacagcctgagggccagaagagagcc
agccaggactttagttatggaaatggtacagggaattcctctgcatctggtttgcagggg
ctagattccaggggcactagtggtattggccctactcagggggctttttcttctctctct
catggagattactatgacaactatcctgagcagaagtgggcagaggagcccagccagttc
accagtatcaggccaagtatggggaactcttggccaggctccaaaaccccaactgaccct
cacctgtaccagtgccagccatcaccaaactcttgcaggtcttttgagagtgggtacagt
agccaggatggcagtggaagtgagggccatcagctcagccgggactctgagcagaagcca
actggccaacagcggtcatcttccttctcccacacactcaattctagagctcctccagca
gccccagaaatagcgacccccttggccctgccacagcatcgctcatcttcattctcagca
cctgccaccttagctgcttcaggtacttcacttcagggagatccatccaaaaaaagtgct
gggatggaaagggatgttcctggtggtatggccaaacccactggggactctcagctctgg
taccatgggagccccaaatcctacatttcaagttcagtgcctgccccgttgccaaccagt
attgactatcagccctctggttctgcttaccctaagtccatcgaccacttagtccctcat
ggtcagactccccagcccaattgcagggattctggcacaaatcccaagttgggtttcccc
aacctctcttcagggccagcgtctgatgctcctggtccttcttttagagaggggcccaat
agtttgccacctgatagtagtcaagggagtgtccatccagagaactccagctctaccaaa
gtcaaattaccctgtcagaccctccttccactcccagagcaagggttgtctgcagtcgaa
ttaaaattagaagcactcacccagcgtctggagcaggagatggatattcatccgaaggag
gattattttggagcatgtgtgaaatgcaataagggcgtctttggagccaaccaggcctgc
caagcaatggggaacctctaccatgacagctgcttcacctgtggggcctgcagtcggaag
ctgaggggtaaagccttttattttgtcaatggcaaagtattctgtgaagaagacttcctg
tattctggtttccagcaatctgccgacagatgttttgtatgtggacacttgataatggac
atgatcctgcaggctttaggaaagtcttatcacccaggctgtttccgctgcgtgatctgt
aacgagtgtctggatggggtgccgttcacggtagacacggagaacaagatctactgtgtc
cgagattaccacaaggtattggcacccaagtgtgcagcatgtggactccctattcttcca
tctgagggctctgacgaaaccatccgtgttgtgtcaatggataaagattaccacgtggag
tgttatcactgtgaggattgtggaatggaactcaacgacgaagacggccaccggtgctac
cctctggaagaccacttgctctgccacgcctgccatctgaagcacattgagaagggggcc
acctcggtggccacacaccagcatccctactag
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