Trichosurus vulpecula (common brushtail): 118850490
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Entry
118850490 CDS
T10126
Symbol
SNRPF
Name
(RefSeq) small nuclear ribonucleoprotein F
KO
K11098
small nuclear ribonucleoprotein F
Organism
tvp
Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118850490 (SNRPF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118850490 (SNRPF)
03041 Spliceosome [BR:
tvp03041
]
118850490 (SNRPF)
03032 DNA replication proteins [BR:
tvp03032
]
118850490 (SNRPF)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
118850490 (SNRPF)
Spliceosome [BR:
tvp03041
]
Complex A
U1 snRNP components
Sm proteins
118850490 (SNRPF)
U2 snRNP components
118850490 (SNRPF)
Complex B
U1 snRNP components
118850490 (SNRPF)
U4/U6.U5 tri-snRNP components
118850490 (SNRPF)
Complex C
U2 snRNP components
118850490 (SNRPF)
DNA replication proteins [BR:
tvp03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
118850490 (SNRPF)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
118850490
NCBI-ProteinID:
XP_036615817
LinkDB
All DBs
Position
5:complement(218546694..218552002)
Genome browser
AA seq
86 aa
AA seq
DB search
MSLPLNPKPFLNGLTGKPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG
EVLIRCNNVLYIRGVEEEEEDGEMRE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
atgagtttacccctcaaccccaaaccattcctgaatggactgacagggaagccggtgatg
gtgaagcttaagtggggcatggagtacaaaggttacctggtatctgtggatggctacatg
aacatgcagcttgcaaatacagaagaatacatagatggggcattgtctggacaccttggt
gaagttttaataaggtgcaacaatgtcctttacatcagaggtgtcgaagaagaggaagaa
gatggggaaatgagagaatag
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