Trichosurus vulpecula (common brushtail): 118850596
Help
Entry
118850596 CDS
T10126
Symbol
LAMB1
Name
(RefSeq) laminin subunit beta-1
KO
K05636
laminin, beta 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04151
PI3K-Akt signaling pathway
tvp04510
Focal adhesion
tvp04512
ECM-receptor interaction
tvp05145
Toxoplasmosis
tvp05146
Amoebiasis
tvp05165
Human papillomavirus infection
tvp05200
Pathways in cancer
tvp05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118850596 (LAMB1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118850596 (LAMB1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118850596 (LAMB1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
118850596 (LAMB1)
09162 Cancer: specific types
05222 Small cell lung cancer
118850596 (LAMB1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
118850596 (LAMB1)
09174 Infectious disease: parasitic
05146 Amoebiasis
118850596 (LAMB1)
05145 Toxoplasmosis
118850596 (LAMB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
ATG17_like
F5_F8_type_C
BNR_6
Motif
Other DBs
NCBI-GeneID:
118850596
NCBI-ProteinID:
XP_036616020
LinkDB
All DBs
Position
5:145356953..145449510
Genome browser
AA seq
1786 aa
AA seq
DB search
MGLLQVHLFGFLALWGASVHAQEPEYSYGCAEGSCYPATGDLLIGRAQKLSVTSTCGLHK
PEPYCIVSHLQEDKKCFMCNSQDPYHETLNPDSHLIENVVTTFAPNRLKIWWQSENGVEN
VTIQLDLEAEFHFTHLIMTFKTFRPAAMLIERSSDFGKTWGVYRYFAYDCESSFPGVSTG
PMKKVDDIICDSRYSDIEPSTEGEVIFRALDPAFKIEDPYSPRIQNLLKITNLRIKFVKL
HTLGDNLLDSRMEIREKYYYAVYDMVVRGNCFCYGHASECAPVDGHSEEVEGMVHGHCMC
RHNTKGLNCELCMDFYHDLPWRPAEGRNSNACKKCNCNEHSGSCHFDMAVYLATGNISGG
VCDDCQHNTMGRNCEQCKPFYYQHPERDIRDPNICEACTCDPAGSQNGGICDRYTDFSAG
LIAGQCRCKLYTEGEKCDICKEGFYGLSADDPFGCQSCACNPLGTIPGGNPCDSETGYCY
CKRLVTGQHCDQCLQEHWGLSNDLDGCRPCDCDVGGSLNNNCSAESGQCLCRPHMIGRQC
SEVESGYYFTTLDHYIYEAEEAHFGPGVSIVERQYIQDRIPSWTGAGFVRVPEGAYLEFF
IDNIPYSMEYDILIRYEPQLPDHWEKAVITVQRPGRILTSSRCGNTIPDDDNQVVSLSPG
SRYVVLPRPVCFEKGVNYTVRLELPQYTSSDSGVESPYTLIDSLVLMPYCKSLDIFTVGG
SGDGVVTNSAWETFQRYRCLENSRSVVKTPMTDVCRNIIFSISALLHQTGLACECDPQGS
LSSVCDPNGGQCQCRPNVVGRTCDRCAPGTFGFGPNGCKPCDCHMQGSINAFCDPVTGQC
HCFQGVYARQCDRCLPGYWGFPSCQPCQCNGHADDCDPVSGECFGCQDYTSGHNCERCLP
GYYGDPIIGSGDHCRPCPCPDGPESGRQFANTCYQDPITLQLVCVCNPGYLGARCDECAS
GYFGNPGDVGGVCQQCQCHNNIDTTDPEACDKGTGRCLKCLYHTEGENCQLCKFGYYGDA
LRQDCRKCVCNYLGTVQEHCDGSDCQCDKITGQCLCLPNVIGQNCDHCAPNTWNLASGTG
CEPCSCDAAHSFGPSCNEFTGQCQCMPGFGGRTCNECQELFWGDPNVECQACDCDPRGIE
TSQCDQSTGQCVCIEGVEGARCDKCTRGYSGVFPDCTPCHQCFALWDVIISELTNRTHKF
LEKAKALKISGVIGPYRDTVDSVERKVNEIKSILAHSPAAEPLKNIGNLFEEAEKLAKDV
TEKMSEVEAKLSDTASENNGTVAELDSLQTDAQSLDKTVKELGEQLEFIKNSDIRGALDS
ITKYFQMSLEAEERVNASTTDPNSTVEQSALTRNKVEDLMMEREAQFREKQEEQSRLLDE
LAGKLQSLDLSATAEQTCGTPPGASCAETPCGGPNCRTDDGEKKCGGPGCDGLVTVAHNA
WQKAMDFDRDVLSALAEVEQLSKTVSEAKLRADEAKQSAQAVLLKTNATKEKVDKSNEDL
RNLIKQIRNFLTQDSADLDSIEAVANEVLKMEMPSTPQQLQNLTEDIRERVESLSQVEVI
LQQSAGDIARAEMLLDEAKRASKSATDVKVTADMVKEALEEAEKAQIAAERAIKQADEDI
QGTQNLLTSIESETAASEETLFNASQRISELERNVEELKRKAAQNTEEADYIGKVVNTVK
QSADDVKKVLDSELSGKYQRVENLIAKKTEESADARKKAEMLQNEAKMLLAQANSKLQLL
KDLEQKYEDNQKYLEDKAQELVKLEEEVRSLLQDISQKVAVYSTCL
NT seq
5361 nt
NT seq
+upstream
nt +downstream
nt
atgggattactccaggtgcaccttttcggtttcctagctctatggggagccagcgtgcac
gcccaagaacccgagtacagttacggctgtgcggagggcagctgctatccagccactgga
gacctgctgattggccgagcccagaaactctcagtgacctccacgtgcggactgcacaaa
cctgagccctactgcatcgtcagccacctccaggaggacaagaaatgtttcatgtgcaat
tcacaggatccttaccatgagacactcaaccctgatagtcatctcattgaaaatgtggtt
acaacatttgctccaaaccgtcttaagatttggtggcaatctgagaatggtgtggagaat
gttactatccagctggatttggaagccgaattccatttcactcatctcatcatgactttc
aagacattccgcccagctgcaatgttgatagaaagatcatctgactttggcaaaacctgg
ggcgtgtacagatactttgcttatgactgtgagagttcattcccaggtgtttcaactgga
ccaatgaaaaaagtggacgatataatctgtgactcccgctactctgacatcgagccctca
accgaaggagaggtgatattccgtgctttagatcctgctttcaaaatagaagatccttat
agtccaaggatccagaatctcttaaaaatcaccaacttacgaatcaagtttgtcaaattg
cacactttgggagacaacttgttggattccagaatggaaatcagagaaaaatactattat
gcagtttatgacatggtagtacgtggaaattgcttctgttatggacatgctagcgaatgt
gccccagtggatggtcacagtgaagaagtcgaaggaatggtccatggacactgcatgtgc
aggcataataccaaaggtttaaactgtgaattgtgcatggacttttaccatgatttgcct
tggaggccagctgaaggtcgtaacagtaatgcatgcaaaaagtgtaactgcaatgagcac
tctggctcatgtcacttcgatatggccgtttacttggcaactggcaacatcagtggagga
gtgtgtgatgattgccaacataacacaatgggacggaactgcgaacaatgcaagcctttt
tactatcagcatccagagagagatatccgagaccctaacatctgtgaggcatgtacctgt
gatccagctggttctcagaatggtggaatttgtgaccgctacactgacttctctgctggc
ctcattgctggtcagtgtcggtgtaaattatacacagagggagagaagtgtgatatttgc
aaagaaggcttctatggattaagcgctgatgatccatttgggtgtcaatcctgtgcttgc
aatcccttgggaactatccctggagggaatccttgtgactccgagacaggatattgctac
tgtaaacgtcttgtaacaggacaacattgtgaccagtgtctgcaagaacactggggttta
agcaatgatctggatggctgtcgaccttgtgactgtgatgtaggaggatcattaaacaat
aactgctcagcagaatcaggccagtgcctgtgcaggccccacatgattggccgacagtgc
agtgaagtggagtctggttattacttcacgaccctggatcactacatttacgaggcggag
gaagcccactttggccccggagtcagcatagtggagagacagtatattcaggatcgcata
ccctcctggactggagctgggtttgtccgagtacccgagggagcctatttggaatttttc
atcgacaacattccgtattccatggagtacgacatccttattcgctatgaaccacagttg
ccagatcactgggaaaaagctgtcatcaccgtacagcgtcctggaaggattctcacgagt
agccgatgtggtaacactattcccgatgatgacaaccaggtcgtgtcgctgtccccagga
tccagatatgtagtccttccgcgtcctgtgtgctttgagaagggtgtgaactacacagtg
cggttggagttacctcagtacacctcctctgatagtggcgtagagagcccatacaccctc
attgattcactggttctcatgccgtactgtaaatccctggatattttcaccgttggaggc
tcaggagatggtgtggtcaccaacagtgcttgggagacctttcaaagataccggtgtttg
gagaatagcagaagtgttgtgaaaacccccatgacggacgtatgcaggaacatcatcttt
agcatttctgccctgctacaccaaacgggactggcttgtgagtgtgatcctcagggatcc
ttaagttctgtctgtgaccctaacggaggccagtgccagtgccgcccaaacgttgttgga
agaacgtgcgacagatgtgccccaggcacctttggattcggccccaatggatgcaaaccg
tgcgactgccacatgcaaggttccatcaacgccttctgtgacccagttactggccagtgt
cactgcttccaaggggtctatgcccggcagtgtgaccgatgcctccctggctactggggc
ttcccgagctgccagccttgtcagtgtaacgggcacgcagatgattgcgatcccgtttcc
ggagaatgtttcggctgtcaggactacacttcgggtcataactgtgaaaggtgcttgcct
ggctattatggagaccctatcattggttcaggagatcactgtcggccctgcccgtgccca
gatggtccggaaagtggacgacagtttgccaatacctgttatcaagatcctatcacttta
cagcttgtgtgtgtctgcaatcctggatacctaggagccagatgtgacgaatgtgcctcg
ggctacttcgggaaccccggagatgttggcggggtgtgccagcagtgccagtgccataac
aacatcgatacaactgaccctgaagcctgtgacaaagggactggaaggtgcctcaagtgt
ctgtatcacaccgagggtgaaaattgccagctttgcaaatttgggtattacggagatgca
cttcggcaggattgtagaaagtgtgtttgtaattatctgggtacggtacaggagcactgt
gatggctctgactgtcagtgtgacaagataaccgggcagtgcctctgccttcctaatgtg
attgggcagaactgtgatcactgtgcaccaaacacctggaacctggccagcggtacaggg
tgtgagccctgcagctgtgatgctgcccattcttttggcccatcctgcaatgagttcacc
gggcagtgtcagtgcatgcccgggtttggaggtcgaacttgtaatgagtgccaagagctt
ttctggggagatccaaatgtggagtgccaggcctgtgactgtgacccaagaggaatcgag
acaagtcagtgtgaccagtccacaggccagtgtgtttgcattgagggtgtggagggggca
cgctgtgacaagtgcacccgtgggtattcaggcgtcttccctgattgcactccctgccac
cagtgctttgcattatgggatgtcatcatctctgagctgaccaacaggacccacaaattc
ctggagaaagcaaaagctttgaagatcagtggtgtgattgggccttaccgagacacagtt
gattctgtggaaaggaaagtcaatgagataaagagtatacttgcccatagcccagctgca
gagcccctgaagaacattggaaacctctttgaggaagcagagaagctagccaaagatgtt
acagaaaaaatgtccgaggttgaagctaagttatctgacacagcctcagaaaataatggc
acagtcgcagaattggattccctgcagacggatgcacagagcttagacaaaacagtgaaa
gaactcggtgaacaactggagtttatcaaaaactcagatattcggggagcgttggacagt
ataaccaagtactttcagatgtctcttgaggcagaagaaagagtgaatgcctccaccaca
gatcccaacagcactgtagaacagtcagcccttactcgaaacaaagttgaagacttaatg
atggaaagagaggcccagttcagggaaaaacaggaggaacagtcccgccttctagatgag
cttgcaggcaaattacagagtttggatctttctgcgacagctgaacagacttgtggaact
cctccaggggcttcctgtgccgagacaccatgtggggggccaaactgcaggacagatgat
ggggaaaagaaatgtggtggacctggttgtgatggcttggtcactgtggcacataacgcc
tggcagaaagccatggacttcgacagagatgtcctcagtgccctggctgaggtggaacaa
ctctcaaagacggtttctgaagctaaactgagggcagatgaagcaaaacaaagtgcccag
gcagttctgttgaaaactaacgccaccaaagaaaaagtggataagagcaatgaggatcta
aggaatctaatcaagcaaattcgaaactttctgactcaggacagtgctgatctggatagc
attgaggctgttgctaatgaagtactgaaaatggagatgccaagcactccacagcagttg
cagaacctgacagaagacattcgggaacgagtagaaagcctttcccaagtggaagttatt
ctgcagcaaagtgctggtgacattgccagagcagagatgctcttagatgaagctaagaga
gccagcaaaagtgcaacagacgttaaagtcactgcagacatggtaaaggaagccctggaa
gaagctgaaaaggctcagattgcagcagaaagggccattaagcaagcagatgaagacatc
caaggaacacaaaacctactgacttcaattgagtctgaaactgcagcatctgaggaaacc
ttattcaatgcctctcagcgaataagtgaactcgaaaggaatgtggaagaacttaagcgg
aaggctgcccagaacactgaggaggcagactatattgggaaagtagtgaatactgtaaaa
caaagtgccgatgatgttaagaaggtcctcgacagtgaacttagtggaaagtatcaaaga
gtggaaaacctaatcgccaagaaaactgaagagtcagctgatgccagaaagaaagcagaa
atgcttcaaaatgaagctaaaatgctgcttgcccaggcaaacagtaagctccagcttctg
aaggatttggagcaaaaatatgaagacaatcaaaaatatctagaagataaagctcaagaa
ttggtgaaactagaagaagaagtccgttcacttctacaggatataagccaaaaagttgct
gtttacagcacttgtttgtaa
DBGET
integrated database retrieval system
