KEGG   Trichosurus vulpecula (common brushtail): 118850859
Entry
118850859         CDS       T10126                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118850859
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tvp03041]
    118850859
   03036 Chromosome and associated proteins [BR:tvp03036]
    118850859
Spliceosome [BR:tvp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118850859
 Complex B
    118850859
 Complex C
   U2 SnRNP specific factors
    118850859
Chromosome and associated proteins [BR:tvp03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    118850859
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 HEAT_2 Htt_N-HEAT_1 XMAP215_CLASP_TOG DUF2298 UNC45-central
Other DBs
NCBI-GeneID: 118850859
NCBI-ProteinID: XP_036616396
LinkDB
Position
5:complement(46923334..46927287)
AA seq 1317 aa
MGEEAQNHSVAPGLARSWSVMVAGDIEAQIREIQGKKAALVEEQGVGLDSIGYYDQEIYG
GNDSRFDGYVTSIAATELEDDDDYSSSTSLLGQKKSGYQPTVALLNDKAQSTEWYDPFSE
HCPSKIADREDEYKKHRRTMIISPERLDPFADGGKTPDPKMNARTYMDVMREQHLTKEER
EIRQQLAEKAKAGGLKVVDGASSQPPSKRKRRWDQTADQTPGPTPKKLSKWDQAETPGHT
PSSRWDETPGHAKGSETPGATPGSKIWDPTPSHAPAGAATPGHGDTPGHATPGHGGATSS
ARKNRWDETPQTERDTPGNGSGWAETPRTDRGGDLLGETPTPGASKRKSRWDETPASQMG
GSTPVLTPGKTPFGTPAMNMATPTPGQIMSMTAEQLQAWRWEREIDERNRLLSDEELDAM
FPEGHKVLPPPAGYVPIHMPARKLTATPTPLGGMTGFHMQTEDRSMKSVNDQPSGNLPFL
KPDDIQYFDKLLVDVDESILSPEEQKERKIMKLLLKIKNGTPPMRKAALRQITDKAREFG
GGLLFNQILPLLMSPTLEDQERHLLIKVIDRILYKLDDLVRPYVHKILVVIEPLLIDEDY
YARVEGREIISNLAKAAGLATMISTMRPDIDNMDEYVRNTTARAFAVVASALGIPSLLPF
LKAVCKSKKSWQARHTGIKIVQQIAILLGCAILPHLRSLVGIIEHGLVDEQQKVRTISAL
AIAALAEAATPYGIESFDSVLKPLWKGIRQHRGKGLAAFLKAIGYLIPLMDAEYANYYTR
EVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEANYIKTEILPPFFKHFWQHRMALDR
RNYRQLVDTTVELANKVGAAEIISRIVDDLKDEAEQYRKMVMETTEKIMGNLGAADIDHK
LEEQLIDGILYAFQEQTTEDSVILNGFGTVVNALGKRVKPYLPQICGTVLWRLNNKSAKV
RQQAADLISRTAVVMKTCQEEKLMGHLGVVLYEYLGEEYPEVLGSILGALKAIVNVIGMP
KMMPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRGAEYVSAREWMRICFELLELLK
AHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQERQNRVCTTVAIAIIAETCSPFT
VLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYIYAVTPLLEDALMDRDLVHRQT
ASAVVQHMSLGAYGFGCEDSLNHLLNYVWPNIFETSPHVIQAVMGALEGLRVAIGACRML
QYCLQGLFHPARKVRDVYWKIYNSIYIGSQDALIAHYPKIYNDEKNTYIRYELDYIL
NT seq 3954 nt   +upstreamnt  +downstreamnt
atgggggaggaggcacagaatcattctgtggcacctggtttggcacggagctggagtgtg
atggtggctggagatattgaagcacagattcgagaaatccaagggaagaaggcagctctt
gttgaagagcaaggagttggccttgattctataggctattatgaccaagaaatttatggt
ggtaatgacagcagattcgatggctatgtaacatcaattgctgcaactgaattagaagat
gatgatgattactcctcatctactagcctgcttggccagaagaagtcaggataccaaccc
acagtggcattgcttaatgacaaagcacagtcaacagaatggtatgacccgttttctgaa
cactgtccttcaaagattgcagatcgtgaagatgaatataaaaagcacaggcgaactatg
ataatttctccagagcgtcttgatccttttgcagatggaggcaagacacctgatcctaaa
atgaatgctaggacgtatatggatgttatgcgagaacagcatttgactaaagaggagagg
gaaattaggcaacaactagcagaaaaagcaaaagctggaggacttaaagttgttgatggt
gcatcatcccagcctccttcaaaacgcaaaaggcgttgggatcagacagctgatcagact
cctggtccaactccaaaaaagctctcaaagtgggatcaagcagagactcctgggcataca
ccttcctcgaggtgggatgaaacacctggtcatgcaaagggcagtgagacacctggagca
acacctggctcaaaaatatgggatcctactcctagtcatgccccagcaggagcagctact
cctggacacggtgatacgcctggtcatgcaacaccaggccatggaggtgcaacttcaagt
gcacgtaaaaacagatgggatgagacccctcaaactgaaagagatactcctgggaatgga
agtgggtgggctgagactcctcgtacagatcgtggtggagacttacttggtgaaacgccg
actcctggagcaagcaaaagaaagtcacgttgggatgaaacaccagctagtcagatgggt
gggagcactcctgttttgactcctggtaaaacaccatttggcacacctgctatgaacatg
gcgacacctactccaggtcaaataatgagcatgactgctgaacagcttcaggcatggaga
tgggagagagaaattgatgagagaaatcgtctgctttctgatgaagagttggatgctatg
ttcccagaaggacataaggtactccctccacctgctggctatgttcctattcatatgcca
gctcggaagctgacagcaactcctacacctttaggtggcatgactggattccacatgcaa
actgaagataggtctatgaaaagtgttaatgaccaaccatctggaaatcttccattttta
aaacctgatgatattcaatactttgataaactgttggtggatgtagatgaatcaatactt
agtccagaagaacaaaaagagagaaaaataatgaaattacttttaaaaatcaagaatggc
acacctccaatgagaaaggctgcattgcgtcaaatcactgacaaagctcgtgaatttgga
ggtgggcttttgtttaatcagattcttccattgctgatgtctccaacgcttgaagaccaa
gaacgtcatttgctcatcaaagtgatcgatagaattttgtacaagctcgatgacttggtt
cgaccctatgtccataagatccttgtggttattgaaccattactgattgacgaagattac
tatgccagagtggaaggcagagagatcatttccaatctggctaaggctgctggcttggca
accatgatttccacgatgcgacctgatatagacaacatggatgaatatgtccgtaacaca
acagctcgagcttttgccgttgtcgcatctgccttgggcattccttccttgttgcccttc
ttgaaagctgtgtgtaagagcaagaagtcctggcaggctaggcatactggtattaagatt
gtacagcaaattgctattcttttgggttgcgccatactccctcatctcagaagtttagtt
ggaatcatcgagcacggccttgtggatgaacaacagaaagtccggaccatcagtgctttg
gctattgccgctctggctgaagcggctactccttatggcattgaatcttttgattctgtg
ttgaagcctttgtggaaaggtatccgccagcacagaggaaagggcttggctgccttcttg
aaagctattggataccttattcctctcatggatgcagaatatgcaaactactatactaga
gaagtgatgttaatccttatcagagaattccaatctcctgacgaagaaatgaaaaagatt
gtgttgaaggtggtaaagcagtgttgtgggacagacggtgtagaagcaaattacatcaaa
acagagattcttcctccttttttcaaacatttttggcaacacagaatggcgttggaccga
agaaattacagacagttagtggataccacggtggagttggcaaacaaagtaggtgcagca
gaaattatttccaggattgtggatgatctgaaagatgaagcggaacagtacagaaagatg
gttatggaaactactgagaaaataatggggaacttgggtgcagcagacattgaccacaaa
ctcgaagagcaacttattgatggcatcctttatgcctttcaggaacagaccacagaggac
tcagtgatattgaatggttttgggacagtagtcaatgcccttggcaaaagagtcaagcca
tatttgcctcagatctgtggtacggttttgtggcgtttgaacaacaaatcagccaaagtc
agacaacaggctgctgacctcatctctcgtactgctgttgttatgaaaacttgtcaagag
gaaaaattgatgggacatttgggggttgtcctctatgagtacttgggtgaagagtaccct
gaagtattgggaagcatccttggagcactgaaggccattgtgaatgtaataggtatgccc
aagatgatgccaccaattaaagacttattgccaaggcttaccccaatcttaaagaataga
catgagaaagtacaagaaaactgtattgatcttgttggacgtattgctgacaggggagca
gaatatgtctctgcaagagaatggatgagaatttgctttgaacttttagagttgttaaaa
gctcataaaaaagctatccggagagccacagtcaacacatttggttatattgcaaaagcc
attggacctcatgatgtattggctacactgctaaataatctcaaagttcaagaaagacaa
aaccgagtatgtacaacagtggccatagctatcatagcagagacatgttcaccattcaca
gtcttgcctgccctgatgaatgaatatcgagttccagagttgaatgttcagaatggtgtt
ttgaaatcactttctttcttgtttgaatatattggagaaatgggcaaagactatatttat
gctgtaacaccattacttgaagatgctttgatggacagagatcttgtacacagacagact
gccagtgcagtggtgcagcacatgtctcttggggcttatggatttggttgtgaagattct
cttaatcatttgttgaattatgtatggcctaatatatttgagacatctccccatgttatt
caagcagttatgggagccctggaaggcctaagagttgctattggagcatgtagaatgttg
caatactgtttgcagggtttgtttcacccagccagaaaagtcagagatgtgtactggaag
atttacaattctatctacattggttcacaggatgcactcatagcacattatccaaaaatc
tacaatgatgaaaaaaacacctatattcgttatgaacttgactacatcttataa

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