Trichosurus vulpecula (common brushtail): 118851537
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Entry
118851537 CDS
T10126
Symbol
NEDD1
Name
(RefSeq) protein NEDD1 isoform X1
KO
K16547
protein NEDD1
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118851537 (NEDD1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tvp04812
]
118851537 (NEDD1)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Other PCM proteins
118851537 (NEDD1)
Microtubules and associated factors
gamma-tubulin ring complex
118851537 (NEDD1)
Cytoskeleton proteins [BR:
tvp04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Gamma-tubulin complex components
118851537 (NEDD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
WDR55
Beta-prop_EML
Beta-prop_WDR3_2nd
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_C
WD40_Gbeta
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
EIF3I
WD40_MABP1-WDR62_1st
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_EIPR1
Beta-prop_VPS8
Beta-prop_DCAF12
Beta-prop_IFT140_1st
Beta-prop_Aladin
Beta-prop_WDR75_1st
WD40_like
Beta-prop_DCAF4
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
NBCH_WD40
KNTC1_N
Beta-prop_SCAP
Beta-prop_SPT8
DUF1668
NRBF2
Motif
Other DBs
NCBI-GeneID:
118851537
NCBI-ProteinID:
XP_036616912
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All DBs
Position
5:complement(217494099..217556431)
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AA seq
668 aa
AA seq
DB search
MQESIRFASSGDDIKIWDSSSMTVIEQFNPHSSSLGISSLCWSSNNNFLVTASAGGDKIV
VSSCKCKPVPLLELAEGQKQTCINLNSTSMYLVSGGLDSTVNIWDLKSKRLHRSLKDHKN
EVTCVTFNWNDCYIASGSISGEIILHSLTTNLSSTPFGHGNGQSVRQLKYSLFKKSLLGS
VSDNGVVTLWDANSQSPYHNFECSHKAPASGISFSPVNDMLLVTIGLDKRIILYDTASKI
QLRTLVAEAPLTAVDFMPDGATLAIGSSRGKIYQYDLRMLNSPVKTVLAHKTSVQCITFQ
CSSALSKSSLNKGSSNKSALTKRTGKVTSTPVQNPAIVREPASLSGTAVLSQLMTTVEGK
GSVAVPDKSGLPRSTNPDVVPPRETECGKNSDLSSFDDSGERSSLGDLFSPVRDDAAVHK
ANEDFVARGDGLDFLPQLNAMFPARKQPSSTNTPGSHLSSLHVSMEFPLTEENESQDIVA
ESKKIQPGKQESREPLKQVSLQENFHQFAKFISSGAESGNLNTSPTSNATRSPEKTERPE
REIQGHLTHEPPINGTTIANPKITSSVTSGVANSLSEKIADTIGNNRSNVPLTSVQIHFI
QNMIQDTLDDFREACHRDIVNLQVEMIKQFHMQLNEMHSLLERYSVNESLVAEIERLREE
NKKLRTNF
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atgcaagaaagcatcagatttgcctcatcgggggacgatattaaaatatgggactcgtcc
tctatgactgtgatagaacagttcaacccccattcatcatctcttggaatcagctctttg
tgttggagtagcaataataattttttggtgactgcatctgctggtggtgataaaatagtc
gtttccagttgcaagtgtaaaccagttccacttttagagttggcggaagggcaaaagcag
acatgtataaacttaaactctacatctatgtatctggtaagcggaggccttgatagcact
gttaatatttgggatttgaaatcaaagagacttcatcgatctcttaaggatcataaaaat
gaagtaacttgtgtgacgtttaattggaatgattgctacattgcttctggatctataagt
ggtgaaattattttgcacagcctaactaccaatttatccagtactccctttggtcatggt
aatggccagtctgttcgtcaattgaagtactccttgtttaagaaatctctcctgggcagt
gtgtctgataatggagtagtaactctctgggatgctaatagtcagagtccataccataat
tttgaatgtagccacaaagctccagcctcaggaatatctttttctcctgtcaatgacatg
ctgcttgtaaccataggcctggataaaagaatcattctctatgacactgcaagtaagata
caactaagaactttagtggctgaggctcccctaactgcagtagacttcatgcctgatgga
gccacattggcaattggatcttcccgtgggaaaatatatcagtatgatttaaggatgttg
aattctccagtaaagaccgtccttgctcacaaaacatctgtgcagtgtataacatttcag
tgttcttctgccctttctaagtcaagtttaaataaaggctcctcaaataaatctgccctg
accaaaagaacgggtaaagtgaccagcacaccagtccaaaatcctgcaattgtcagagaa
ccagcttctctatcaggtactgctgttttatctcagctcatgaccacagttgaagggaaa
ggatcggtggctgttccggacaaatcaggcttgcctcgaagcacaaatccagatgttgtt
ccacctagagagacagaatgtgggaaaaattctgatctctccagctttgatgattctggc
gagagaagcagtttaggggacctcttctcaccagtgagagatgatgctgctgtccacaag
gcaaatgaggactttgttgccagaggagatggcctagactttctcccacaattaaatgca
atgtttccagcaagaaaacaaccatcaagtacaaacacaccaggatcacatcttagctct
cttcatgtctcaatggaattcccacttacagaagagaatgaaagtcaagatatagtagca
gagagtaagaagatacaaccaggaaaacaagaatcgagggaacccttaaaacaggtatct
ttgcaggagaatttccatcagtttgccaagttcatctcctccggtgctgaatctggaaat
ctgaatacctccccaacatctaatgccacaagaagccctgagaaaacagaaaggccagag
agagaaattcaaggccatttgacacatgagcccccaatcaatggaactaccatagctaat
ccaaagataacgtcctctgttacttccggagttgccaattcactttcagaaaaaatagca
gataccattggtaacaacagatcaaatgtaccgctgacatctgttcaaatccattttatc
cagaacatgatacaggacacattggatgactttagggaagcatgtcatcgtgacattgtg
aatttgcaagtggagatgattaaacagttccatatgcaattgaatgaaatgcactcctta
cttgaaaggtactcagtcaatgaaagtttagtagctgaaattgagagactgcgagaagag
aacaaaaaacttcggaccaatttttaa
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