Trichosurus vulpecula (common brushtail): 118851590
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Entry
118851590 CDS
T10126
Symbol
NOD1
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1 isoform X1
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04621
NOD-like receptor signaling pathway
tvp05132
Salmonella infection
tvp05133
Pertussis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118851590 (NOD1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
118851590 (NOD1)
05133 Pertussis
118851590 (NOD1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
tvp04054
]
118851590 (NOD1)
Pattern recognition receptors [BR:
tvp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
118851590 (NOD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
CARD
LRR_6
WHD_NOD2
LRR_4
RsgA_GTPase
AAA_16
ABC_tran
AAA_22
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
118851590
NCBI-ProteinID:
XP_036616980
LinkDB
All DBs
Position
5:complement(21339112..21380196)
Genome browser
AA seq
951 aa
AA seq
DB search
MEIQALPEVTAVPKDARHCIRLLKVDRERLVTYIHNVQCLVDNLLVNEYFSVEDAEIVGA
CPTLPDKVRKMLDLVQSKGEEVCEYLISVLQQIPDAFVDLQPWLEEIRFTPSEVVRGRTI
VNTDPVSRYIQKLRSEWGRDSKFITSYSQKEEMLLADTYTENTMELLNFRNESLGSVSSL
GSLLDDSTGVINQEGETVFIFGDAGVGKSVLLQKLQSLWAREELGSGAKFFFPFRCRTFS
CFPPSAALSLRDLLFMHSCCPELEPDAVFAFLLRFPRSVLFTFDGFDELHSDFDLSQVPD
AASPLQPAHPLALLASLLRGKLLQGAGKVLTSRTGVEVPRALIRKKVQLRGFSPSHLRAY
TCKFFPDRALQVRVLNQLDASPHLCTLCSVPLFCWIIFRCFQHFHGTHEGAHHLPDQTLT
LTDIFLLMTEAHLNRALPTSLLQRNTRSQVETFRSGRETLCALGRLAYWGMLKNLFVFSQ
EEVEASDVQEGDLQLGFVRAVPEPGPIGDQPAYEFFHITVQSFFTALFLIADDKVSTKEL
LKFFGEWTPRGQRAASLTLPLLRLSCLGGSNLDKEDPFRNNDHVQFTNLFLCGLLSKAQQ
RLLRHLVPVVALRKKRRALWKHLFASLRSYLKSLPRTRTEEFNQVQAMPTFIWMLRCIYE
TQSQKVGQLAARGICANYIKLTYCNACSADCSALSFVLHHFPKQLALDLDNNNLNDYGVK
ELRPCFSRLTVVRLSVNQVTDAGVKVLYEELTKYKIVTYLGLYNNQITNIGAKYVAKILE
ECTNLTHLKLGANYITSEGGKCLALAIKKSKSIVDIGMWGNKIGDEGAKAFADALRNHPS
LSNLSLAFNGIATEGGKSLAQALQQNSSLKIVWLTKNDLDDEVAESLAEMLEVNQTLRDL
WLIQNQITAKGVSRLADALQKNSTILDICLNGNPIEPEEAKVFQDEKRFHF
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atggaaatccaagccctacctgaggtgacggcagtgcccaaggatgctcgccattgcatc
aggctgctcaaggtggaccgagaacggctggtcacctacattcacaatgtccagtgtctg
gtcgacaacctgcttgtcaacgaatacttctctgtggaggatgcggagatcgtgggcgcc
tgccccactctgccggacaaggtccgtaagatgctggacctggttcagagcaaaggggag
gaagtgtgtgagtacctcatctctgtgctgcaacaaatcccggatgcctttgtcgatctg
cagccatggctggaggagatccgcttcacaccctcagaggttgtgaggggcagaacaatt
gtgaacaccgaccctgtgagccggtacatccagaagctgcgctcagagtggggccgggat
tccaagttcatcacttcctacagtcagaaggaggagatgctgctggcggacacgtacacg
gagaacaccatggagctgctgaacttccgcaatgagagcctgggcagtgtgagcagcctg
ggctccctgctggatgactccacgggggtcatcaaccaggagggagagacggtcttcatc
ttcggcgacgcgggcgtgggcaagtcggtgctgctgcagaagctgcagagcctgtgggcg
cgggaggagctgggctcgggggccaagttcttcttccccttccgctgccgcacgttcagc
tgctttccccccagcgcggccctcagcctccgggacctgctcttcatgcacagctgctgc
ccggagctggagccggacgcagtgttcgccttcctcctgcgcttcccccggtcggtcctc
tttaccttcgacggctttgacgagctgcactcggactttgacctgagccaggtgcccgat
gcagcctccccgctgcagccggcccaccccctggccctgctggccagcctactccgaggc
aagctgctccagggcgccgggaaggtgctgacctcccgcaccggcgtcgaggtccctcgt
gccctcatccggaagaaggtgcagctgcggggcttctcccccagccacctgcgggcctac
acctgcaagttcttccccgaccgggccctgcaggtgcgagttctgaaccagctggacgct
agcccccacctgtgcaccctgtgttctgtgcccttattctgctggatcatcttcaggtgc
ttccagcacttccatggcacccacgagggcgcccatcatctgcccgaccaaacgctgact
ctcacagacatcttcctgctcatgacggaggcccacctgaaccgggccctgcccaccagc
ctcctgcagcgcaacacacgaagccaggtggagaccttccgctcaggccgggagacgctg
tgcgccctgggccgccttgcctactggggcatgttgaagaatctcttcgtcttcagccag
gaggaggtggaggcctccgacgtgcaggagggggacctccagctgggctttgtccgggcc
gtgccagagcccgggcccatcggagaccagccggcctatgaattcttccacatcactgta
cagtccttcttcacggccctcttcctcatcgctgacgacaaggtgagcacaaaggagctc
ctgaagttctttggtgagtggacacccagggggcaaagggcagcctcccttacactcccc
ttgctcaggctgagctgcctgggcgggagcaacctggacaaggaggaccccttccgaaac
aatgaccacgtccagttcaccaacctcttcttgtgcgggctgctgtccaaggcccagcag
cggctcctccggcacctggtgccagtagtggccctgcgcaagaagcggagggctctctgg
aagcacctgtttgccagcctgcgctcttacttgaagagcctgccccgcactcgcacggag
gagttcaaccaagtgcaggccatgcccaccttcatctggatgctgcgctgcatttatgag
acgcagagccagaaggtgggccagctggccgccaggggcatctgcgccaactacatcaag
ctgacctactgcaacgcctgctcggccgactgcagcgctctctccttcgtcctgcaccac
ttccccaagcagctggccctcgacttggacaacaacaacctcaatgactatggggtgaag
gagctgcgcccctgcttcagccgcctcacggtggtcagactcagtgtgaatcaggtcact
gatgccggcgtcaaggtgctatatgaggagctaacgaaatataaaattgtgacatatttg
gggttatacaataaccaaattaccaacatcggagccaaatatgttgctaagatccttgaa
gagtgcacgaacctcacacacttgaaactgggagcaaactacataacaagcgaaggaggg
aaatgtctggccttggctattaagaagagcaagtcaatcgtggacattggtatgtggggc
aataagataggcgatgaaggggccaaggccttcgcagacgccctgaggaatcaccccagc
ttatccaacttgagtcttgccttcaatggcatcgccacagaaggaggcaaaagcctcgct
caagcactccagcaaaacagctcattgaagatagtttggttgactaaaaacgacctcgat
gatgaagtagcagagagcttggcggagatgctggaagtcaatcagacgctgagagatttg
tggctcattcagaaccagatcacagccaagggggtctcacgcctggcggatgctctccag
aagaactcaaccatcctggatatctgcctgaacgggaacccaatcgagccggaagaggcc
aaagtctttcaggatgagaagcggttccacttttga
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