Trichosurus vulpecula (common brushtail): 118851620
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Entry
118851620 CDS
T10126
Symbol
NUP107
Name
(RefSeq) nuclear pore complex protein Nup107 isoform X1
KO
K14301
nuclear pore complex protein Nup107
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118851620 (NUP107)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118851620 (NUP107)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118851620 (NUP107)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118851620 (NUP107)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118851620 (NUP107)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
118851620 (NUP107)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Phage_int_M
DUF2310
Motif
Other DBs
NCBI-GeneID:
118851620
NCBI-ProteinID:
XP_036617021
LinkDB
All DBs
Position
5:complement(251050056..251106303)
Genome browser
AA seq
941 aa
AA seq
DB search
MENTNDFGEMPSPVVRDVEVTRTARRQSAHRRVSILTPHEDTLANSTPRSQIIPRTPSSS
RQSFTSLNRSLLRQPDVSTILATGIKSPRIAHSSTLLGNLSMVSNLDENNWTAAFSPQRS
ALFTNVDPSNVTEDVTFSAAMLREDDPGEAATMSMYSDFLHTFLKHASTTVFELVEEYEN
ICDSQVNILGKIVSRATPGLQKFSKTASVLWLLQQEMVTWRLLSSLYRDRIQSVLEEENA
FEIASLNASEKTVVDTLFQRDSLIRQSQLVVDWLESIAKDDIEDFSDNIEFYAKSVYWEN
TLHTLKQRQLISHVGSVRPLVTELDPDAPIRQKMPLDDLDREDDNRLLKYLFTLIRSGMT
EEAQRLCKRCGQAWRAATLEGWKLYHDPNLDGGTEIEPVEGNPYRCIWKISCWRMAEDEL
FNKYERAIYAALSGNLKQLLPVCETWEDTVWAYFRVMVDSLVEQEVRTSVVTLDETEELP
REYLEANWTLEKVFEELQATDKKRVLEENQEHYHIIQKFLILGDIDGLMDEFNKWLSRGR
SILPGHLLRFMTHLILFFRTLGIQTKEEVSVEVLKVYIQLLISEKHISLIAFYTCHLPQD
LAVAQYAAFLEGVTEFEQRHHCLELAKEAGLDVATITKTVVENIRKKDTGDFSHHDMAPS
LDTVTTEEDRLKIDVIDWLVFDPAQRAEALKQGNAIMRKFLASKKHEAAKEVFVKIPQDS
IAEIYNQWEEQGMESPLPAEDDNAIREHLCIRAYLEAHETFNEWFKHMNSAPLKPILIPQ
ASFTEKVAHEHKEKKYEMDYGIWKGHLDALTAEVKEKMYNVLLFVDGGWMVDVREFPVFK
LIPAFILWVEDAEEDHERAHQMVLLRRLCLPMLCFLLHTILHSTGQYQECLQLADMVSSQ
RHKLYTVFSKEELRKLLQKLRESSLMLLDQGLDPLGYESQS
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggagaatacgaacgactttggggagatgccttctcctgttgtccgagatgtggaggtg
acacggacagctcgaagacaaagtgcacacagaagagtgtctatcttgactccccatgaa
gatactttggcaaatagtacaccaagaagccaaataattccacgaactcctagctcatcg
cgccaaagctttacttcacttaatcgaagtttattaaggcagccagatgtttctaccatt
cttgcaacaggaataaagtctcctcggattgctcattcgtcaaccttattgggaaatcta
tccatggtatctaatctagatgagaataactggacagcagcattctccccacagcgctca
gcgctcttcacaaatgtagatccctctaatgtgacagaagatgtcacttttagtgctgct
atgctacgtgaggatgatccaggagaagctgcaacaatgagtatgtattctgacttcctg
cacacttttcttaagcatgcttcaactacagtttttgaacttgtagaagaatatgagaat
atttgtgatagccaggtaaatatattaggtaaaatagtgagcagagcaacacctggactc
cagaagttttcaaagacagccagtgtgctgtggcttcttcagcaggagatggttacgtgg
agactgctgtcctctctttacagggacagaatacagtctgtactagaagaagaaaatgcg
tttgaaattgcctctctaaatgccagtgaaaagacagttgtggatacactatttcaacgc
gattcacttattcgacaaagccagctggtggtagattggttagagagtattgccaaggat
gacattgaagatttctcggataacatcgagttttatgcaaaatcagtttattgggaaaac
actctgcataccttgaaacagcggcaattaatatcccatgtcggaagtgttcgtcctctc
gttaccgaattggaccccgatgcacctataagacagaaaatgccacttgatgatttggat
cgagaagatgacaacagattactcaaataccttttcacacttatccgttctgggatgaca
gaagaggctcagcgcctctgtaaacgttgtgggcaagcctggagagctgcaacacttgaa
gggtggaaattataccatgatcctaaccttgatggaggaacagaaatagaaccagtggaa
gggaatccatataggtgcatttggaaaataagctgttggagaatggcagaagatgagctg
tttaataaatatgagagagcaatctatgctgccttaagtggaaatctcaagcaacttctc
ccagtctgtgaaacgtgggaagataccgtgtgggcctactttagggtgatggtggacagt
ttggtggaacaggaagttcggacctcagttgtaacattagatgaaactgaagaactgcct
cgagaatatttggaagcaaattggactttagaaaaggtttttgaagagctccaagctaca
gataaaaagagagttttagaagagaatcaagaacactaccatataattcaaaaattcctt
atcttgggtgacattgatggtttgatggatgaatttaataaatggctttccagaggaagg
agcattctaccaggacaccttctccgcttcatgacccatctcattttgttttttcgcact
ctgggaatacagaccaaagaagaagtgtctgtggaagttttaaaggtctacattcagctg
ttaataagcgagaaacatatcagcctcatagcattttatacttgccatttgcctcaagat
ctagctgttgctcaatatgcagcatttttggaaggtgttacagaatttgagcagcgtcat
cactgtttggagctggctaaagaagcaggtctggatgttgcaacaataacaaaaaccgta
gttgagaacattcgaaagaaagatactggcgactttagtcatcatgatatggcaccttcc
ctagatactgtcactacagaggaggaccgcttaaagattgatgtgattgactggttggta
tttgatcctgcacaaagggctgaggcactaaagcaaggcaatgctatcatgagaaagttc
ttggcatctaagaaacatgaagctgccaaagaagtgtttgtaaaaattccccaggattca
atagcagaaatttacaatcagtgggaagaacaagggatggaaagtccacttccggccgaa
gatgacaatgctatcagagaacatttatgcattagagcttatttggaagctcatgaaacc
tttaatgagtggttcaagcatatgaattcagctccacttaaacctattttgatacctcaa
gcttccttcacagagaaagtagctcatgagcacaaagaaaagaaatatgaaatggactat
ggcatatggaagggtcacttggatgccctgactgccgaagtaaaagagaaaatgtacaat
gtcttactgtttgttgatggagggtggatggtagacgtcagagagttccccgtctttaag
ttgatccctgctttcattttgtgggtggaggatgctgaagaagaccatgaaagagcccat
cagatggttttgctgaggaggctttgcctgccaatgttgtgcttcctgcttcacacaatt
ttgcacagtacaggccagtaccaggagtgcctacagcttgctgatatggtttcttcacag
cgccacaagctttacacggtattttctaaggaagaactaaggaagttgttacagaagctg
agggaatcatcattaatgcttttggatcagggacttgatccattgggatatgagagtcaa
tcgtaa
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