Trichosurus vulpecula (common brushtail): 118851739
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Entry
118851739 CDS
T10126
Symbol
SMARCD1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03082
ATP-dependent chromatin remodeling
tvp04714
Thermogenesis
tvp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118851739 (SMARCD1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118851739 (SMARCD1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118851739 (SMARCD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvp03021
]
118851739 (SMARCD1)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118851739 (SMARCD1)
Transcription machinery [BR:
tvp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118851739 (SMARCD1)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118851739 (SMARCD1)
PBAF complex
118851739 (SMARCD1)
GBAF(ncBAF) complex
118851739 (SMARCD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
DivIC
Motif
Other DBs
NCBI-GeneID:
118851739
NCBI-ProteinID:
XP_036617146
LinkDB
All DBs
Position
5:complement(275524195..275534430)
Genome browser
AA seq
515 aa
AA seq
DB search
MAARAGFQSVAPSGGAGAASGAGAAAALGPGGTPGPPVRMGPAPGQGLYRSPMPGAAYPR
PGMLPGSRMTPQGPSMGPPGYGGNPSVRPGLAQSGIDQSRKRPAPQQIQQVQQQAVQNRN
HNAKKKKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRLDIQEALKRPIKQKR
KLRIFISNTFNPAKSDAEDGEGTVASWELRVEGRLLEDSALSKYDATKQKRKFSSFFKSL
VIELDKDLYGPDNHLVEWHRTATTQETDGFQVKRPGDVNVRCTVLLMLDYQPPQFKLDPR
LARLLGIHTQTRPVIIQALWQYIKTHKLQDPHEREFVICDKYLQQIFESQRMKFSEIPQR
LHALLMPPEPIIINHVISVDPNDQKKTACYDIDVEVDDTLKTQMNSFLLSTASQQEIAAL
DNKIHETIETINQLKTQREFMLSFARDPQGFINDWLQSQCRDLKTMTDVVGNPEEERRAE
FYFQPWAQEAVCRYFYSKVQQRRQELEQALGIRNT
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccgggctggtttccagtcagtggctccgagcggcggcgccggagctgcgtca
ggggcgggcgcagcggccgctctgggcccgggtgggaccccggggcccccagtgcgaatg
ggcccggcacccggccaagggctctaccgctccccgatgcccggagcagcctatccgcgt
ccaggcatgttgccagggagccgtatgacacctcagggaccttctatgggacctcccggc
tatggggggaacccttcagttcgacccggtctggcccagtcaggaatagatcagtcccga
aagagaccagcccctcagcagatccagcaggtccagcagcaggcggtccagaatcgaaat
cacaatgcaaagaaaaagaagatggctgacaaaattctacctcaaaggattcgtgagctg
gtaccagaatcccaggcctatatggatctcttggcttttgaaaggaaactggatcagacc
atcatgaggaaacggctagatatccaggaggccttgaaacgacctatcaagcaaaaacgg
aaacttcgtattttcatttcgaatactttcaatccagctaaatcagatgctgaagatggg
gaaggaactgtggcttcctgggagcttcgggtggaaggacgactcctcgaggattcagct
ctgtctaaatatgatgctaccaagcagaagcgtaaattctcctccttcttcaagtctttg
gtgattgagctggacaaagatttatacgggccagacaaccacctggtggaatggcacagg
actgctaccacccaggagacagatggcttccaggtgaagcggccaggagatgtaaatgtt
cgttgcactgttttgctgatgctagattaccagcctcctcagtttaaattggacccccgc
ctggcccggcttctgggtatccacacccagacacgtccagtgatcatccaagcactgtgg
cagtacatcaagactcataagcttcaggacccccatgaacgggagtttgttatctgtgat
aaatacctccagcagatattcgagtcgcaacggatgaagttctcagagatcccccagcgg
ctccatgccttgcttatgccaccagagcccatcatcattaatcacgtcatcagcgttgac
cccaatgaccagaagaagactgcctgttacgacattgacgtggaggtggatgataccctc
aagacccagatgaattccttcctgctatctactgcaagccagcaggaaattgctgccctg
gacaacaagatccatgagaccatagagaccatcaaccagctgaaaacccagagagagttc
atgctgagttttgcgagagacccccaaggcttcatcaatgactggcttcagtcccagtgc
cgagatctgaagaccatgactgatgtagtgggtaacccagaggaggagcgccgagctgag
ttctacttccagccatgggctcaggaggctgtgtgcagatacttctactctaaggtgcaa
cagagacggcaggaactggagcaggccttgggcatccgaaatacataa
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