KEGG   Trichosurus vulpecula (common brushtail): 118852186
Entry
118852186         CDS       T10126                                 
Symbol
SHH
Name
(RefSeq) sonic hedgehog protein
  KO
K11988  sonic hedgehog
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04340  Hedgehog signaling pathway
tvp04360  Axon guidance
tvp05200  Pathways in cancer
tvp05205  Proteoglycans in cancer
tvp05217  Basal cell carcinoma
tvp05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    118852186 (SHH)
 09150 Organismal Systems
  09158 Development and regeneration
   04360 Axon guidance
    118852186 (SHH)
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    118852186 (SHH)
   05205 Proteoglycans in cancer
    118852186 (SHH)
  09162 Cancer: specific types
   05226 Gastric cancer
    118852186 (SHH)
   05217 Basal cell carcinoma
    118852186 (SHH)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:tvp01002]
    118852186 (SHH)
  09183 Protein families: signaling and cellular processes
   00536 Glycosaminoglycan binding proteins [BR:tvp00536]
    118852186 (SHH)
Peptidases and inhibitors [BR:tvp01002]
 Cysteine peptidases
  Family C46: hedgehog family
   118852186 (SHH)
Glycosaminoglycan binding proteins [BR:tvp00536]
 Heparan sulfate / Heparin
  Morphogens
   118852186 (SHH)
SSDB
Motif
Pfam: HH_signal Hint Peptidase_M15_3 Ribosomal_S6e
Other DBs
NCBI-GeneID: 118852186
NCBI-ProteinID: XP_036617755
LinkDB
Position
5:88335909..88347795
AA seq 480 aa
MDEMLLLTRFLLVVLVSSLLMSSGLACGPGRGFGKRRHPKKLTPLAYKQFIPNVAEKTLG
ASGRYEGKISRNSERFKELTPNYNPDIIFKDEENTGADRLMTQRCKDKLNALAISVMNQW
PGVKLRVTEGWDEDGHHSEESLHYEGRAVDITTSDRDRSKYGMLARLAVEAGFDWVYYES
KAHIHCSVKAENSVAAKSGGCFPGSATVHLEQGGTKLVKDLSPGDRVLAADDQGRLLYSD
FLAFLDREDGAKKVFYVIETREPRERLLLTAAHLLFVAPHNDSGPEPLPPGEPGLLPSGQ
PSDWAWQRPPPGVAAGRQSLFASRVRPGQRVYVVEERGGDRRLLPAAVHSVSLREEATGV
YAPLTAQGTILINRVLASCYAVIEEHSWAHWAFAPFRLAHALLAVLSPAGRDCGGGGGGP
GGGGGGRLLLPTASPDVPDAPDAGTTTAGIHWYSQLLYQIGTWLLDSDSLHPLGMAVKSS
NT seq 1443 nt   +upstreamnt  +downstreamnt
atggacgagatgctgctactgacgagatttctgctggtggtcctcgtctcttccctcttg
atgtcctcggggctggcgtgcggacctggcaggggatttgggaagaggcggcaccccaag
aaactgacccccttagcctacaagcagtttatccccaacgtggcggagaaaaccctaggg
gctagtggaagatacgaagggaagatctccagaaactccgagcgatttaaagaactcacc
cccaattacaatcctgacattatatttaaggatgaagagaacaccggagcggaccggctg
atgactcagaggtgtaaagacaaactgaatgccctggctatctctgtcatgaaccagtgg
cccggggtgaaactccgggtcactgagggctgggatgaggatggccaccactctgaagag
tcgctacactatgagggccgggcagtggacatcaccacttcagaccgggaccgaagcaaa
tatggcatgctggcccgcctggccgtggaggcaggcttcgactgggtctattacgaatct
aaagcccatatccactgctctgtgaaagcagagaactccgtggccgccaagtcgggcggc
tgcttcccgggctcggccaccgtgcacctggagcagggcggcacgaagctggtgaaggac
ctgagccccggggatcgggtgctggcggccgacgaccagggccgcctactctacagcgac
ttcttggccttcttggaccgggaggatggagccaagaaggtgttctacgtgatcgagacg
cgggagccccgagagcgcctgctgctcaccgctgcccacctgctcttcgttgctccgcac
aacgactcgggtccggagccgctgcctccgggggagccggggctgctgccgtcggggcag
ccgtcggactgggcctggcagaggccgccgcctggggtcgcggccggccgccagtcgctc
ttcgccagccgggtccgacccggacagcgggtctacgtagtggaggagcggggcggtgac
cggaggctgctgcccgccgccgtgcacagcgtgtccctgcgcgaagaggccacgggagtt
tacgcgccgctcacggcgcagggcaccatcctcatcaaccgcgtgctggcctcttgctac
gccgtcatcgaggagcacagctgggcgcactgggcgttcgcccccttccgcctggcccac
gccctgctggccgtgctctcccccgcgggcagggactgtggcgggggcggcggcggcccc
ggcgggggcggcggcggtcgtctcctcctccccacagcctcgccagatgtgcccgacgct
ccagatgccgggaccacgacggcaggcatccactggtactcgcagctgctctaccaaata
ggcacctggctgttggacagtgactcactgcaccccctggggatggcagtcaagtccagc
tga

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