Trichosurus vulpecula (common brushtail): 118852905
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Entry
118852905 CDS
T10126
Symbol
FIP1L1
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118852905 (FIP1L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118852905 (FIP1L1)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
118852905 (FIP1L1)
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GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
118852905
NCBI-ProteinID:
XP_036618520
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Position
6:complement(157169248..157255367)
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AA seq
583 aa
AA seq
DB search
MSAGEVERLVSELSGGTGGDEEEEWLYGDENEVERPEEENASANPPSGIEDETAENGISK
PKVTETEDDSESDSDDDEDDVHVTIGDIKTGGPQYGSYGTAPVNLNIKTGGRVYGTAGTK
VKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFNEDTWKAYCEKQKRI
RMGLELIPNKITAEDYTMEVTPGAEIQDGRYNLFKVQQGRTGNAEKETVLQSAKAEFTSP
PSLFKTGLPPSRNSASSQSQTSSASRKANSGIGKWQDRYGRAESPDLRRLSGTIDVIGQT
ITISRVEGRRRANENSNIQVLSERSAAEVDNNFSKPPPFFPPGAPPTHLPPPPFLPPPPT
VSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGHSSGYDSRSARAFPYGNVAF
PHLPGSAPSWPSLVDTTKQWDYYARREKDRERERERDRERDRDRDRERERTRERERERDH
SPTPSVFNSDEERYRYREYTERGYERHRASREKEERHRERRHREKEETRHKSSRSNSRRR
HESEEGDSHRRHKHKKSKRSKEGKEAGSEPAPEQESTEAAPAE
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggggaggtggagcggctggtgtcggagctgagcggcgggactggtggggat
gaggaggaagagtggctctatggcgatgaaaatgaagttgaaagaccagaagaagaaaat
gccagtgctaatcctccatctggaattgaagatgaaactgcagaaaatgggatatcgaaa
ccaaaggtgactgagactgaagatgatagtgagagtgacagtgacgatgatgaagatgat
gttcatgtcaccatcggtgatattaaaactggaggaccacagtatgggagctatggaaca
gcacctgtaaatcttaatatcaagacaggaggaagagtttatggaactgcagggactaaa
gtcaaaggtgtggaccttgatgcacctggaagtattaatggagttccactgttggaagta
gatttggattcttttgaagataaaccatggcgaaaaccaggtgctgatctctccgattac
tttaattatggttttaatgaagatacatggaaagcttactgtgaaaaacaaaagaggata
cgaatgggacttgaattaataccaaataaaattacggccgaagactatactatggaagtt
acaccaggtgcagagatccaagatggcagatacaatctttttaaggtacagcagggcaga
actggaaatgcagagaaggaaacagtgctacagtctgccaaagctgagtttacatctcct
ccttctctattcaaaacaggacttcctccaagcagaaacagcgcctcttctcagtctcag
acaagttctgcctccagaaaagccaattcaggcatcgggaagtggcaggatcgatatggg
agggccgaatcgcctgacttaaggagattatctggcacaatagatgtaattggtcagact
atcactatcagccgagtagaaggaaggcgacgtgcaaatgaaaatagcaacatccaggtt
ctttcggaacgatctgctgctgaagtagacaacaattttagcaaaccacctccatttttc
cctccaggagctcctcctactcatctcccaccacctccatttcttcctcctcctccaact
gtcagcactgctccacctctgattccacccccaggtattccaataactgtaccacctcca
ggttttcctcctcccccaggagctcctcctccatctcttataccaacaatagaaagcggg
cattcttctggatatgatagtcgttctgctcgtgcatttccatatggcaatgttgctttt
cctcatcttcctggttctgctccttcatggcctagtcttgtcgacaccaccaagcagtgg
gactactatgccaggagagagaaagatagagagcgagagagagaacgagaccgagaaaga
gatcgcgaccgtgatagagaaagagaacgtaccagagagagagagagagaacgtgatcac
agcccaacgccaagtgtgttcaacagtgatgaagaaagatacagatacagagaatataca
gaaagaggctacgagcgtcatagagcaagtcgagaaaaagaagagcgacacagagaaaga
agacacagagaaaaagaggagacaagacacaagtcatctagaagtaacagcagacgacgc
catgaaagtgaagaaggggacagtcacaggaggcacaaacacaaaaaatcgaaaaggagc
aaagaaggaaaagaagctggcagtgaacctgccccagagcaggagagcactgaggctgcc
cctgctgaatag
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