Trichosurus vulpecula (common brushtail): 118853171
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Entry
118853171 CDS
T10126
Symbol
ATG13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04136
Autophagy - other
tvp04140
Autophagy - animal
tvp04211
Longevity regulating pathway
tvp05010
Alzheimer disease
tvp05014
Amyotrophic lateral sclerosis
tvp05016
Huntington disease
tvp05017
Spinocerebellar ataxia
tvp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118853171 (ATG13)
04136 Autophagy - other
118853171 (ATG13)
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
118853171 (ATG13)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
118853171 (ATG13)
05014 Amyotrophic lateral sclerosis
118853171 (ATG13)
05016 Huntington disease
118853171 (ATG13)
05017 Spinocerebellar ataxia
118853171 (ATG13)
05022 Pathways of neurodegeneration - multiple diseases
118853171 (ATG13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118853171 (ATG13)
03029 Mitochondrial biogenesis [BR:
tvp03029
]
118853171 (ATG13)
Membrane trafficking [BR:
tvp04131
]
Autophagy
Autophagosome formation proteins
ULK complex
118853171 (ATG13)
Atg1 complex
118853171 (ATG13)
Mitochondrial biogenesis [BR:
tvp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
118853171 (ATG13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
118853171
NCBI-ProteinID:
XP_036619052
LinkDB
All DBs
Position
6:258277849..258313684
Genome browser
AA seq
558 aa
AA seq
DB search
MEKRFVYAMDADLSSQDRKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFN
LAIKDIPEVTHEAKKALAGQLPAVGRSMCVEISLKTSEGDSMELEIWCLEMNEKCDKEIK
VSYTVYNRLSLLLKSLLAITRVTPAYQLSRKQGREYVILYRIYFGEVQLNGLGEGFQTVR
VGTVGTPVGTITLSCAYRINLAFMSTRQFERTPPIMGIVIDHFVDRPYPSSSPMHPCNYR
TAGEDAGVAYPSVEDSQEVCTTSFSTSPPSQCVFTVSKAHFQTPTPVVTDTLRVPMAGLA
FSHQLASSRLSYQPAALGVGSAELAHPVVFAAGSSAAHPHQLMVPGKEGGVPLAPSQPAH
GTQADHEKMATFTPSDGAHYIVTPSSSEDTETVSNSSEGRGSPHDVLEAILVRKVGALVN
NSLDQVTMTNLDIPFAMFAPKNFELEDNDPMVNPPDSPDTESPLQGSLHSDGSSGGSSGN
THDDFVMVDFKPAFSKDDILPMDLGTFYREFQNPPQLSSLSIDIGAQSMAEDLDSLPEKL
AVHEKNVKEFDAFVETLQ
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagagatttgtgtatgcaatggacgctgatctcagttcccaggacaggaaggac
ctggacaagttcatcaaattttttgccctgaagacggtccaagtgatagtccaggcacgt
ttgggagaaaagatttgtactcgctcgtcatcttccccaacaggatctgactggttcaac
ttggccatcaaggatatcccagaggtcacacatgaggccaagaaagccctggcggggcag
cttcccgccgtggggaggtcgatgtgcgtggaaatctcactcaagacttcagagggagat
tccatggaactagaaatttggtgtcttgaaatgaatgaaaagtgcgacaaagaaattaaa
gtttcctacactgtgtacaataggctgtcattactgctgaagtctctgctcgccatcact
agagtgacaccagcctaccaactctccaggaaacagggtcgtgaatatgtcatactctac
aggatatactttggagaagtccaattgaatggcttaggagaaggtttccagacagtccga
gttggcacagtaggcacccctgtgggcactatcactctgtcctgtgcctacagaattaac
ctcgccttcatgtctaccaggcagtttgagaggaccccacctatcatggggattgtcatt
gatcattttgtggaccgtccctaccccagctcctcgcccatgcacccctgcaactacagg
acggctggtgaggatgccggggtggcatacccgtctgtggaggactctcaggaagtctgc
accacctctttctcaacctcccctccatcccagtgtgtgttcactgttagtaaggcacat
tttcagacccctactccagtggtgacggataccctgagggtccccatggcaggactggcc
ttttcccaccaactcgccagctcccgcctttcctatcagcccgctgctctgggagttgga
tcagctgagctggcccatccagtggtctttgctgctggctcgagtgctgcccaccctcat
cagttaatggttccagggaaggaaggtggggtgcccctggctcccagccagcctgcccat
ggcacccaggccgaccatgagaagatggcaacctttaccccttctgatggtgcccactac
atagtcactccttccagcagtgaagacactgaaactgtttccaacagcagtgaaggccga
ggctccccccatgacgttctggaggccatcttggttcggaaggtgggagcgcttgtcaac
aattcactggatcaggtaacaatgaccaatttggacatcccctttgccatgtttgctccc
aagaactttgagcttgaggataatgatcccatggtaaatcctcctgattccccagacact
gaatctcctctccaaggcagcttacactccgatgggtccagcggcggcagcagtggaaac
acgcacgatgactttgtcatggttgactttaagccagccttctcaaaggatgacattctg
cccatggatttagggaccttctatcgggagtttcagaatcccccccagctgagcagcctc
tccatcgacattggggctcagtccatggctgaagacctggactcgctccccgaaaaactg
gctgtgcatgagaagaatgtcaaagagttcgatgcctttgtggagaccctgcaataa
DBGET
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