Trichosurus vulpecula (common brushtail): 118853385
Help
Entry
118853385 CDS
T10126
Symbol
CSTF3
Name
(RefSeq) cleavage stimulation factor subunit 3
KO
K14408
cleavage stimulation factor subunit 3
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118853385 (CSTF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118853385 (CSTF3)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
118853385 (CSTF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
TPR_14
NRDE-2
TPR_16
TPR_19
TPR_6
Motif
Other DBs
NCBI-GeneID:
118853385
NCBI-ProteinID:
XP_036619318
LinkDB
All DBs
Position
6:complement(244484777..244564471)
Genome browser
AA seq
717 aa
AA seq
DB search
MSGDGAAEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLATIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPVCFQGPFVQVDELMEIFRRCKIPSSVDEAVRIIT
GGVPDLAVEGNGPMESNTMLTKAVKRPNEDSDEDEEKGAVVPPIHDIYRARQQKRIR
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgacggagccgccgaacaggctgctgaatatgtcccagaaaaagtgaagaaa
gcagaaaagaaattagaagagaatccatatgaccttgacgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacatatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagttatttcagagatgccttatgaaggttttacatattgatcta
tggaagtgttatctttcctatgttagagaaaccaagggaaaactacccagctacaaagaa
aaaatggcacaagcatatgactttgctttggataaaattggaatggaaattatgtcttat
cagatttgggtagattacatcaatttcttgaaaggcgtggaagctgttggatcttatgca
gaaaatcaaagaataacagctgtccggagagtttatcagcgaggttgtgttaatccaatg
atcaatattgagcaactttggagagactataataaatatgaagagggcatcaacatacat
ctagctaagaaaatgattgaagatagaagtagagattacatgaatgccaggcgtgtggca
aaggagtatgaaacagtaatgaaaggtttagaccgcaatgccccttcagtacctccacag
aatactccccaagaggctcagcaagtagacatgtggaagaaatacatacagtgggaaaag
agcaaccctctccgaacagaagatcagactctcatcacaaaaagagtgatgtttgcatac
gagcagtgcctgctggtgctgggccatcacccagatatttggtacgaagctgcccagtac
ctggaacagtccagcaaactgctggctgagaaaggggacatgaacaatgctaaattattt
agtgatgaagctgctaatatatatgagagagcgattagcactttgttgaagaagaatatg
ctactttattttgcatatgcagattatgaagagagtcgaatgaaatatgagaaggtgcac
agcatctacaatcgacttctggctattgaggacattgacccaactctggtatatatccag
tatatgaagtttgcaaggcgagcagaaggcatcaaatctggaaggatgatattcaaaaaa
gcaagagaagacaccagaacacgccatcatgtctatgttactgcagcattaatggagtac
tactgtagtaaggataaatcagtggcctttaagatttttgagctggggttaaagaaatat
ggggacattccagaatacgtattagcctatattgactacctgtcccacctcaatgaggac
aataatacccgagttttgtttgaacgagtattgacctctggaagccttccacctgagaaa
tctggagaaatatgggccagattccttgcttttgaaagtaacattggtgacctagccagt
atcctgaaagtggagaaaagacgattcacagcattcaaggaagaatatgaagggaaggaa
acagcattactggtcgataggtacaagttcatggatttgtatccctgctctgcgagtgaa
ctgaaagctcttggctataaggacgtctctcgggccaagctagcgaccatcattccagac
cctgtggtagctccttccatagtgcctgtccttaaagatgaagtggatagaaaacctgaa
tatcccaagccagacacacagcagatgatcccctttcagccaagacatttagcaccccca
ggcttacaccctgtgcctggcggggtgtttccagtgccacctgctgctgtagttttaatg
aaactcctccctcctcccgtctgtttccagggtccttttgtacaagtagatgagctgatg
gaaattttccgaagatgcaagatcccgagctccgttgatgaagccgtgaggatcattacc
ggaggagtgccagacctggccgtggaagggaacggccccatggagagcaacaccatgctc
accaaagcagtcaaacggcccaacgaggattcggatgaggatgaagagaaaggtgccgtg
gtgccacccatccatgacatctacagagcccgccaacagaagagaatccggtga
DBGET
integrated database retrieval system
