Trichosurus vulpecula (common brushtail): 118853387
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Entry
118853387 CDS
T10126
Symbol
SHANK2
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 2
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
118853387 (SHANK2)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
SAM_1
SAM_2
Ank_4
Ank_3
Ank_5
SH3_2
SH3_9
PDZ_6
PDZ
FERM_f0
SH3_1
SAM_4
SAM_CEP-1_C
Motif
Other DBs
NCBI-GeneID:
118853387
NCBI-ProteinID:
XP_036619320
LinkDB
All DBs
Position
6:complement(279977288..280694986)
Genome browser
AA seq
1843 aa
AA seq
DB search
MPRSPTSSEDEMAQSFSDYSMESESDSSKEETIYDTIRATSEKPSVKMEESQGNTLVIRI
IIQDLQQTKCIRFNPDASVWVAKQRILCTLNQSLKDVLNYGLFQPASNGRDGKFLDEERL
LREYPQHVPKGIPSLEFRYKRRVYKQANLDEKQLAKLHTKTNLRKCMDHIQHHSVEKISK
MLERGLDPNFHDTETGETPLTLAAQLDNSVEVIKALKNGGAHLDFRAKDGMTALHKAARA
KNQVALKTLLELGASPDYKDSYGLTPLYHTAVVGGDPYCCELLLHEHATVGCKDENGWCE
IHQACRYGHVHHLEHLLFYGADMGAQNASGNTALHICALYNQDSCARVLLFRGGDKELKN
YNSQTPFQVAIIAGNFELAEYIKNHKETDIVPFREAPTYSNRRRRPPSTLAAPRVLLRSN
SDNNLNVNNLPDWSVCSSASSHRSLSPQLLQQMQGNPNGTVKTIGSYTPGPRSRSPSLNR
LGEDARRQQQAPPLPQRHISSGFAPGASKDAISAFDYPGPKRKLYSAVPGRLFVVVKPYQ
PQVDGEIHLHRGDRVKVLSIGEGGFWEGSTRGHIGWFPADCVEEVQCKPNESKPETRTDR
TKKLFRHYTVGSYDSFDASSDCIIEEKTVVLQKKDNEGFGFVLRGAKADTPIEEFTPTPA
FPALQYLESVDEGGVAWQAGLRTGDFLIEVNNENVVKVGHRQVVNMIRQGGNHLVLKVVT
VTRNLDPDDTARKKAPPPPKRAPTTALTLRSKSMTSELEELDKVDEVVPATKPSRTAENV
TVESRVATIKQRPTSRCFPSVADMNSIYERQGIAVMTPTVPGSPKGPFLGIPRGTMRRQK
SIDSRIFLSGITEEERQFLAPPMLKFTRSLSMPDTSEDIPPPPQSLPPSPPPPSPTAYNS
PKSPTARPYGTIKPPFNQNSVPKVSPSPRPENIGTVMREKGMYYRRELDRYSLDSEDLYS
RNAAAQANFRNKRGQMPENPYSEVGKIASKAVYVPAKPARRKGMLVKQSNVEDSPEKTCS
IPIPTIIVKEPSTSSSGKSSQGSSMEIDAQAGEPPGQLRPDDSLSVSSPFAAAIAGAVRD
REKRLEARRNSPAFLSTDLGDEDVGLGPGPPVPRTRPSKFPEDEMFGDEDSLGQLPSSTP
VVAPRESENHFGSSEAGGQSDPGSVRTLNSVPKAKGPENNAGTAAKGGSAVSPDNYVHPL
TGRLLDPNSPLALALSARDRALKETQQGPGKGEAAKADLNKPLYIDTKMRPNMEPAFPSV
TRQSTRGPLRRQETENKYELDKDRKGDEKKNMLISIVDTSQQKTAGLLMVHTVDAAVAED
SLEEEEEKEDMDAEPERSPTEVPESIPETEGALQASASGPGKVMAAAGSVDEPVVLPFRI
PPPPLASVDLDEDFIFTEPLPPPLEFANSFDIPDDRAAPTPPPTDPGKLRKDSPQSPSFA
PSQSANSVDSKKPAGLSNCLPASFLPPPESFDNVTDSGIEEVDSRSSSDHHLETTSTIST
VSSISTLSSEGGETLDTCTVYADGQAFMVDKPPVPPKPKMKPMITKSNAPHKDTLVEENT
DGFVISLPAQAPAPPPPPAGAQAGGTAKVLQQRTSKLWGDVPEVKSPILSGPKANVISEL
NSILQQMNREKSTKPGEGLDSPTGTKTASLSTRSTDVMSTVSGTRSTTVTFTVRPGTTQP
ITLQSRPPDYDARTAVTRRAPSPVVSPTEIAKEALTAPLTAVSAASPSPALSEVFSLPSQ
PPSGDLFGLSAAPRSRSPSPSILQQPISNKPFTTKPVHLWTKPDVADWLESLNLGEHKET
FMDNEIDGSHLPNLQKEDLIDLGVTRVGHRMNIERALKQLLDR
NT seq
5532 nt
NT seq
+upstream
nt +downstream
nt
atgccacgaagtcccacatcaagcgaggatgagatggcccagagcttctccgattactca
atggaatctgagtcagatagctccaaagaagaaaccatctatgacaccatccgggcgacc
tctgagaagccatccgtcaagatggaagagagccaaggcaatactctggtcattcgcatt
atcattcaggacttacagcagacgaaatgcattcgatttaacccagacgcttcagtgtgg
gtggcgaagcagcggatactctgcacattgaaccagagtctcaaagatgtcctaaattat
gggctcttccaacctgccagcaacgggcgagatggaaaattcctggatgaggagcggctt
ctcagggagtacccacagcatgtgcccaaaggaattccttctttggagttccgatacaaa
aggcgggtgtacaagcaagcgaatctggacgagaagcagctggccaagctccataccaag
accaacctaaggaaatgcatggaccatattcagcatcattcggtggagaaaatctccaag
atgttggagagaggcctggatcccaacttccatgacacagaaacaggagaaacgccactg
actttagcagcccagcttgacaactctgtagaggtgatcaaagctctcaaaaatggaggc
gcccacttggacttccgagccaaagatggaatgacagccctccacaaagccgctcgagcc
aagaaccaggtggccctcaagactctcctggagctcggggcctctccagactacaaggac
agctatggcctcacacccctgtatcacacagcggttgtcggaggggacccttactgctgt
gaactgctcctccatgagcatgccacagtgggctgcaaggatgagaatggctggtgcgaa
attcaccaggcctgtcgctatggacatgtccaccaccttgagcacttgttattctatgga
gctgatatgggagcccagaatgcctctgggaacactgccctacacatctgtgccctttat
aatcaggatagctgtgctcgagttttgttgttccgtgggggtgacaaggaattgaagaat
tacaacagccagacgccgttccaggtggcgataatcgcaggaaactttgagctggctgaa
tatattaagaaccacaaggaaacagatattgtgccattcagagaggccccgacatactca
aaccggcggcggagacccccgagcacactggcagccccccgagttctgctgcgctccaac
agtgataacaacctcaacgtgaacaacctccccgactggtctgtgtgctcctcggcctct
tcccaccgcagcctttcaccccagctcctccagcagatgcagggcaacccaaatggcaca
gtaaaaaccatcgggagctacacaccggggcctcggagccgctctccatcgctgaaccgg
cttggggaggatgccaggaggcagcagcaggccccacccctgccacagcggcacatcagc
tctggcttcgctcctggtgccagcaaggatgccatctctgcctttgactacccggggccc
aagcgcaagctctacagcgcggtacctgggagactgtttgttgttgtaaagccatatcaa
cctcaagtcgatggagagatccaccttcaccggggcgacagggtcaaagtgttgagcatt
ggtgaaggcggcttctgggaaggcagcacccggggccacattggctggtttcctgctgat
tgtgtggaggaagtccagtgtaaaccaaatgaaagcaagccagaaactcgcactgatcga
accaagaaactctttcgacactacacagtgggctcctatgacagctttgatgcctccagt
gactgcattatcgaggagaagacagtggtcctgcaaaagaaagacaatgaaggctttggc
ttcgtgctgcgaggggctaaagctgatactccaattgaagagtttaccccaacgccagca
ttccctgccctgcagtatctggagtccgtggatgaaggaggagtagcatggcaggcaggc
ttgagaactggtgacttcctcattgaggtaaacaatgaaaatgtcgtgaaagtcggtcac
agacaggtggtgaacatgatccgccaaggagggaatcacttagtcctcaaggttgtcacg
gtaaccagaaacctcgatcccgatgacacagccaggaagaaagcccctccgcctcccaag
cgagcgccaaccacagccctgaccttgcggtctaaatctatgacctctgagctggaagag
cttgataaagtcgatgaagttgtaccagctactaagccatcaaggacagcagaaaacgtg
actgtggagtcaagagtggcgaccatcaagcagcgcccgaccagcaggtgcttcccatct
gtggcagacatgaattccatttacgagcggcagggaattgcagtgatgacccccacggtc
ccagggagtccgaagggcccattcctgggcatccctcgaggtacaatgagaaggcagaaa
tcaatagacagcagaatctttctatcaggaataacagaggaagagcgccaattcctggct
cccccgatgctaaagttcacaagaagcctgtccatgcctgacacctccgaagatatccct
cctcctccccagtccttacctccttctccaccaccgccctccccaactgcttacaattca
cccaagtcgccgacagccagaccctacgggacaatcaagccccccttcaatcagaattcg
gttcccaaggtctccccttcccctcggcctgaaaacatcggcacagtgatgagggagaag
ggtatgtattatcggagagagctggaccgctattccctcgactcagaagacctgtacagc
cggaatgccgccgcccaggcaaacttcagaaacaagcggggtcagatgccagaaaacccc
tattccgaagtggggaagatcgcgagcaaggccgtttatgtccctgccaagccagccagg
aggaaggggatgctggtgaagcagtccaatgtggaggacagtcctgagaaaacctgctcc
atccccatcccgacaatcatcgtgaaggagccatccacaagcagcagcggtaagagcagc
caggggagcagcatggagatcgatgctcaggcgggtgagccaccagggcagctgcggccc
gacgacagcctgagcgtcagcagcccctttgcggcagccatcgccggagcagtgcgagac
agggagaagagactggaggccaggaggaactccccggccttcctctccacggacttgggt
gatgaggacgtgggattgggcccagggcctcccgtgcccaggacaaggccttccaagttc
ccagaggacgagatgtttggcgacgaggacagcctgggccagctgccatcgtccactcca
gtagtggcaccgagggagtccgagaaccattttggcagcagcgaggctggcggccagagt
gacccaggcagcgtgaggacattgaattcagtccccaaagcaaaaggtcctgagaacaac
gctgggacagcagccaagggtggaagcgcagttagccctgataactatgtccatcccctc
actggaaggctattagaccccaattcgccattggctctggccctctcggccagggataga
gccttgaaagaaactcagcagggtcccggcaagggggaagcagccaaggcagatctaaac
aagcccctctacatcgataccaaaatgcggcccaacatggagccggcctttccctctgtg
accaggcagagcacccgcggcccactgaggaggcaggagacggagaacaaatatgagctg
gacaaggacagaaagggagacgaaaagaagaacatgcttatcagcatcgtggacacctcc
cagcagaagaccgccggcctgctgatggtccataccgtggatgctgctgtggcggaagac
tccctagaagaggaagaggagaaagaagacatggacgcagagccagaacgctctccaact
gaggtgcccgaaagcattcccgaaaccgaaggtgctttacaggcctcggcctccggccca
ggcaaggtgatggctgcggcgggctccgtggacgagccggtcgtcttgcccttccgtatc
ccgccccctcctctggcgtccgtggatctggacgaagattttatttttacagaaccattg
cctccgcccctagagtttgcaaacagttttgatattcctgacgaccgggccgctccaact
ccccctcccacagacccgggaaagctgaggaaagactccccccagtccccttcatttgcc
cccagccagtcagccaattccgtagacagtaagaagccggcaggtctttcaaactgtttg
ccagcctcgttcctgccgcccccagaaagttttgataatgtcactgactccgggatcgag
gaggtggacagccggagtagcagtgaccaccatcttgagacaaccagcactatctccacc
gtgtccagcatctccaccttgtcctcggaagggggcgagaccctggacacatgcacggtc
tatgcagatgggcaggcatttatggttgacaagccccctgtacctccgaagccaaaaatg
aagcccatgatcaccaaaagcaatgcacctcacaaagacaccctggtagaagagaacacc
gacggctttgtgatctccctgcctgcacaggcgccggcaccgcccccgccgcccgctggc
gcccaggcaggggggaccgcaaaggttctccagcaaaggacctccaagctgtggggggat
gtccccgaggtcaaaagcccgattctctcaggcccaaaggcgaacgtcattagcgaattg
aattcaatcctgcagcaaatgaacagagagaaatcgacgaaaccaggggaaggattggat
tcgcccactggaaccaaaaccgctagcctcagtacaaggagtacggatgtcatgagcacc
gtctcagggacgcggagcacgacggtcaccttcaccgtccgccctggcaccacccagccc
atcaccctgcagagcaggccgccggactatgacgcgaggaccgctgtcacgagacgtgcc
ccaagccctgtggtctcccccaccgagatcgccaaggaggccctgaccgctcccctgacc
gccgtctcggctgcgtccccttcacctgctctgtctgaggtttttagccttccgagccag
ccaccttcaggggacctgtttggcttgagcgcggcaccgcgcagcaggtccccatccccc
tcgatactgcaacagccaatctcaaataagccttttacaactaaacctgtccacctgtgg
accaagcccgatgtggctgattggctggaaagcttaaatttaggggagcataaagagacc
ttcatggacaatgaaatcgacggcagtcacttaccaaaccttcagaaggaagacctcata
gacctcggagtaactcgagtcgggcatagaatgaacatagaaagagccttgaagcagctg
ctggacagataa
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