Trichosurus vulpecula (common brushtail): 118853518
Help
Entry
118853518 CDS
T10126
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04120
Ubiquitin mediated proteolysis
tvp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
118853518 (SYVN1)
04120 Ubiquitin mediated proteolysis
118853518 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118853518 (SYVN1)
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118853518 (SYVN1)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118853518 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-HC5HC2H
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
118853518
NCBI-ProteinID:
XP_036619537
LinkDB
All DBs
Position
6:complement(274907871..274913355)
Genome browser
AA seq
594 aa
AA seq
DB search
MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMLLLGALDFLFVNHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSIDLQNENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATAEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPVQSPAAPEPAEQGPPPAPHQP
PILPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPMPPPSNADVPPASPSTSANASRPTGSV
PEPPAAPGFPFPPPWMGMPLPPPFGFPPMPVPPAGFAGLTTEELQALEGHERQHLEARLQ
SLRNIHTLLDAAMLQINQYLTVLASLGPPRPPAPASPPESSTPAAAASSSTSIPSSEATP
PSPGASPLPPEPVQQQPGPSAETVGAEDLPEDAEPDAVELRRRRLQKLGSPASH
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgccgtgatgatggccgccagcctggcgctgaccggggccgtggtggcc
cacgcctactacctcaagcaccagttctaccccaccgtggtgtacctgaccaagtccagc
cccagcatggccgtcctgtacatccaggccttcgtgctcgtctttctgctgggcaaggtg
atgggcaaggtgttcttcggccagctgagagctgccgagatggagcacctcctggagcgc
tcctggtacgcagtgacggagacctgcctggccttcacggtctttcgggatgacttcagc
cctcggttcgtggcgctcttcaccctcctcctcttcctcaagtgtttccactggctggct
gaggatcgagttgactttatggaacggagccccaacatctcctggctctttcactgccga
attgtctccctcatgctcctcctgggtgccctggacttcctctttgtcaatcatgcctat
cacagcatcctgacccggggggcctccgtacagctggtctttggctttgagtacgccatc
ctgatgaccatggttctcaccatcttcatcaaatacgttctgcactcgatcgatctccag
aacgagaacccctgggacaacaaggccgtctacatgctttacacagaattgttcacaggc
ttcatcaaagttctgctttacatggccttcatgacaatcatgatcaaggtgcacacattc
ccactctttgccatccggcccatgtacctggctatgaggcaatttaagaaggcggtgact
gacgccatcatgtctcgccgggccatccgaaacatgaacacactgtacccggatgccacg
gccgaggagcttcaggccatggacaatgtctgcatcatctgcagggaggagatggtaact
ggcgccaagcggcttccctgcaaccatatcttccacaccagctgcctgcgctcctggttc
cagcggcaacagacctgccccacctgccgaatggatgtcctgcgggcctcacttcccgtc
cagtccccagctgccccggagcctgctgagcaaggccccccacctgccccccaccagccc
cccatccttccccagccccccaactttccccaaggcctcctgcctccatttcctccaggg
atgttccccctgtggcctcccatgggcccctttccccccatgccgccccccagcaatgca
gatgtcccacctgcctcaccttccacctcggccaatgcctctcggcccactggctctgtc
ccagagcccccggcagctcctggctttcccttccctcctccctggatgggcatgcccctg
cctccaccgtttgggttcccccccatgccagtgcccccagcaggctttgcaggcctgacc
actgaggagctgcaggccctggagggccatgagcgacagcatctggaagcaaggctacaa
agccttcgaaatatccacaccctgctggatgctgccatgctgcagatcaaccagtatctc
actgtgctggcctccctgggccctccccgacctcctgcccctgccagtccccctgaatcg
tctacacctgctgcggcagcctcctcttccaccagcatccccagttcggaggcaacgccc
ccctcaccaggagcctccccacttcctcctgagccggtgcagcagcagccaggtccatct
gctgagactgttggggccgaggacctgccggaagatgcagagcctgacgcggtggagctg
cgccgccgccgcttgcagaaactgggatcccctgcttctcattga
DBGET
integrated database retrieval system
