Trichosurus vulpecula (common brushtail): 118853780
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Entry
118853780 CDS
T10126
Symbol
NUP54
Name
(RefSeq) nucleoporin p54 isoform X1
KO
K14308
nuclear pore complex protein Nup54
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
tvp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118853780 (NUP54)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
118853780 (NUP54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118853780 (NUP54)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
118853780 (NUP54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
XhlA
AAA-ATPase_like
Nup54_C
Motif
Other DBs
NCBI-GeneID:
118853780
NCBI-ProteinID:
XP_036619875
LinkDB
All DBs
Position
6:78576637..78600717
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AA seq
513 aa
AA seq
DB search
MAFNFGAHTGGTATAATPAAPAGTFGGFGTTTTTASSAFSFSAPTNTGTSGLFGATQNKG
FGFGSTGFGTTAGTSTGLGTGLGFGTFNTQQTQNTLGGLFSQPTQAPVQSNQLINTASAL
SAPTLLGDERDAILAKWNQLQAFWGTGKGYFNNNIPPVEFTQENPFCRFKAVGYSCMPNN
KDEDGLVVLIFNRKEADIRGQQQQLIDSFHKILGGNQSLTVNVEGVKTLPDDQTEVVIYV
VERSPNGTSRRVPATTLYAHFEQANIKTSLQQLGVTLSMTRTELSPAQIKQLLQNPPAGV
DPIIWEQAKVDNPDSEKLIPVPMVGFKELLRRLKVQDQMTKQHQTRLDIISEDISELQKN
QTTTLAKIAQYKRKLMELSHRTLQVLIKQEIQRKSGYAIQADEEQLRVQLDTIQCELNAP
TQFKGRLNELMSQIRMQNHFGAVKSEERYYVDADLLREIKQKAVKCFVQRKQCCGRGLYL
SSLSAVNERPEDLGFSLTVTYAAGCVALGQSGP
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcgttcaacttcggggctcatacgggcggcacggccacggccgctacccccgccgcc
cccgcgggtacgtttggagggtttgggacgaccaccaccacagcaagctctgcattcagc
ttttctgctcccactaacacaggcaccagtggactctttggtgctactcagaacaaaggt
tttggatttggttctactggttttggcacaactgcaggaaccagtactggtttgggaact
gggctaggatttgggacgttcaatacccagcagactcaaaatactttaggtggtctcttc
agtcagcccacccaagcccctgtccagtctaaccaactgatcaatacagcaagtgctctt
tctgccccaacgctactgggagatgagagagatgctattttggcaaaatggaatcagctc
caggccttctgggggacaggcaaagggtacttcaacaataacatcccacctgtggagttc
acccaggaaaatcccttctgtagatttaaggcagtgggttatagctgcatgcccaacaat
aaggatgaagacggcctggtggttttaattttcaatagaaaggaagcagacatccgaggc
cagcaacaacagctaatagactcattccataagatcttgggaggaaaccagagccttact
gtcaatgtggaaggtgtgaaaacgttgccagatgaccagacagaagttgtcatatatgtt
gttgaacgttctccaaatggcacatcaagacgagttccagctacaacactctatgcccac
tttgaacaagcgaacataaaaacttcattacagcagcttggagttacactttctatgacc
agaacagaactctcccctgcacagatcaagcagcttttacagaatcctcctgctggtgtt
gatccaattatctgggaacaggccaaagtagataaccctgattctgaaaagctaattcct
gtgccaatggtgggtttcaaagaacttctccgaagactgaaggtccaggatcagatgaca
aagcagcatcagaccagattagatattatatctgaagatatcagtgaattacagaagaat
cagaccaccactctggctaaaatagcacaatacaagaggaaactcatggagctttcccat
aggaccttgcaggtcctgattaagcaggaaattcagaggaagagcggctatgccatccag
gctgatgaggagcagctccgagtacagcttgatacaattcagtgtgaactgaatgcacct
acacagttcaagggccgactgaatgagttgatgtcccagatcaggatgcagaatcacttt
ggagctgtgaaatctgaagaacggtattatgtagatgcagatcttctgcgggaaatcaag
cagaaggctgtaaagtgcttcgtgcaaaggaaacagtgttgcggacgggggctgtatctg
tcatcactcagtgctgtaaacgagaggccagaagaccttggttttagtttgaccgtgaca
tatgctgctggctgtgtagccctgggccagtcggggccttga
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