Trichosurus vulpecula (common brushtail): 118853906
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Entry
118853906 CDS
T10126
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118853906 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118853906 (TNPO1)
03009 Ribosome biogenesis [BR:
tvp03009
]
118853906 (TNPO1)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118853906 (TNPO1)
Ribosome biogenesis [BR:
tvp03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
118853906 (TNPO1)
Pre-60S particles
118853906 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_GCN1
TPR_IMB1
HEAT_2
Arm
TPR_IPO5
IBN_N
Vac14_Fab1_bd
TOR1L1_N
Cnd1
HEAT_EF3_N
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
Adaptin_N
CEP104-like_TOG
MMS19_C
HEAT_GCN1_C
HEAT_Maestro
HEAT_GCN1_C_2
INTS7_N
TPR_TTI1_C
UNC45-central
Dopey_N
RTP1_C1
VPS15-like_hel
HEAT_DAAF5
Motif
Other DBs
NCBI-GeneID:
118853906
NCBI-ProteinID:
XP_036620039
LinkDB
All DBs
Position
1:complement(445042791..445118250)
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AA seq
890 aa
AA seq
DB search
MEYEWKPDEQGLQQILQLLKESQSPDTSTQRTVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV
MLLEVRMDRLLPHMHNIVEYMLQRTQDQNENVALEACEFWLTLAEQPICKDVLCRHLSKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSRTVAQQHDEDGIEEEEDD
DDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSGVIQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggagtatgagtggaaacccgacgagcaagggcttcagcaaatcctgcagctgctcaaa
gagtcccagtccccggacacctccacccagagaaccgtgcaacaaaaactggaacaactc
aaccaatatcctgattttaacaactacctgatttttgttcttacaaaattaaaatctgaa
gatgaacctacaaggtctttgagtggtcttattttgaagaataatgtgaaagcccatttt
cacaacttcccaaatggagtaacagattttattaagagtgaatgtctgaataatattggt
gactcctcccctctgatcagagccactgtgggtattctgattacaaccattgcctccaag
ggggaattacagaattggcctgagctcttgccaaagctctgtagcttgttggattctgaa
gattataatacgtgtgaaggagcatttggagcccttcagaaaatatgtgaagattctgct
gaaattttagatagtgatgttttagaccgtccacttaacatcatgattcctaaattttta
cagttcttcaagcatagtagtcccaaaataaggtctcatgctgtagcatgtgtcaatcaa
tttatcatcagtagaacccaagctctgatgttacacatcgattcttttattgagaatctg
tttgcattggctggtgacgaagaaccagaggtacggaaaaatgtgtgtcgggctctcgtg
atgctgcttgaagtccgaatggatcgcctgcttccacatatgcataatatagttgagtac
atgcttcagaggacccaagatcaaaatgaaaatgtggctttggaagcttgtgaattttgg
ctcactttggctgaacaaccaatctgcaaagatgtactctgtagacatctttctaagttg
attcctgtattagtgaatggcatgaagtactcagaaatagatattattctacttaagggt
gatgttgaagaagatgaagctattcctgatagcgaacaagatataaggcctcgttttcat
cgatcacggacagtggctcagcagcatgatgaagatggaattgaggaagaggaagatgat
gatgatgaacttgacgatgatgatacaatatccgactggaatctaagaaagtgttctgct
gccgctctagatgtcctggcaaatgtgtttcgtgatgaacttttgccacatattttgccc
ctcttgaaagaactactttttcatcctgaatgggtagttaaagaatcaggcatcttagtc
ttaggagcaattgctgaaggttgtatgcagggtatgataccatatctgcctgaactcatc
cctcaccttattcagtgcctctctgataaaaaggctcttgtacgttccattacatgctgg
actcttagccgctatgcacactgggtagttagccagcccccagatacgtacttgaagcca
ttaatgacagaattacttaaacgtattctagatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctaccctggaagaggaggcttgtacagaacttgttccctaccttgct
tatatacttgataccctggttttcgcatttagtaaataccagcataagaatctgctcatt
ctttatgatgccataggaacattagcagattctgtagggcatcatttaaataaaccagaa
tatatacagatgctaatgcctccactaatccagaaatggaacatgctgaaagatgaagat
aaagatctcttccctttacttgagtgcctgtcttcggttgccacggccctgcagtctggc
ttccttccatactgtgaacctgtgtatcagcgttgtgtgaaccttgtccagaagactctt
gcacaagccatgttacacaatgctcaacccgatcaatatgaggctcctgataaagatttc
atgattgtggctcttgatttactcagtggcctagctgaaggacttggaggcaacattgaa
caactagttgctcgaagcaacattctaacactcatgtaccaatgcatgcaggataaaatg
ccagaagttcgacagagttcctttgctttgttaggtgacctgacaaaggcatgctttcag
catgttaaaccttgcatagcggatttcatgccaatattgggaaccaacctaaatccagaa
tttatttcagtctgcaacaatgctacgtgggcaattggagaaatctcaattcaaatgggt
atagagatgcagccttatattccaatggtgttgcaccagcttgtagaaatcattaacaga
cccaacacaccaaagacgttgttagagaatacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgtacctct
ctgaggaatataagagacaatgaggaaaaggattcagcatttcgtgggatttgtactatg
atcagtgtcaaccccagtggagtaatccaagattttatatttttctgtgatgctgttgca
tcgtggattagtccaaaagatgatctcagagacatgttctgtaagatccttcatggattt
aaaaatcaagttggggatgaaaattggaggcgtttctctgaccagtttcctcttccttta
aaagagcgtcttgcggcttactatggagtttaa
DBGET
integrated database retrieval system
