Trichosurus vulpecula (common brushtail): 118854005
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Entry
118854005 CDS
T10126
Symbol
USH1C
Name
(RefSeq) harmonin isoform X1
KO
K21877
harmonin
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tvp03037
]
118854005 (USH1C)
Cilium and associated proteins [BR:
tvp03037
]
Primary cilia and associated proteins
USH complex and associated proteins
118854005 (USH1C)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
USH1C_N
PDZ_6
PDZ_2
FapA
Baculo_LEF5_C
Motif
Other DBs
NCBI-GeneID:
118854005
NCBI-ProteinID:
XP_036620198
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Position
6:221615025..221680211
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AA seq
552 aa
AA seq
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MDRKVAREFRHKVDFLIENDAEKDYLYDVLRMYHEAMDVSVLVGDLKLVINEPNRLPLFD
AVRPLIPLKHQVEYDQLTPRRSRKLKEVRLDRTHPEGLGISVRGGLEFGCGLFISHLIKG
GQADNVGLQLGDEIVRINGYSISSCTHEEIINLIRTKKTVSIKVRHIGMIPVKNSPDESL
KWQFVDQFVAESGGGRGGLPSLGSRENREKKIFISLVGSRGLGCSISSGPTQKPGIFISN
VKPGSLSAEVGLETGDQIVEVNGIDFTNIDHKEAVNVLKSSRSLTISIVAGAGRELFMTE
RERQAEVRQRELDRQELMLQKRLAMESNKILQEQQEKERQRKKEIAQKAAEENERYRKEI
EQITEDEERFKKQWEEEWGTKGQLLMPKTITAEVHPPPPRKPKYEKGVESPPHADDDLDR
GTKNQQVQDFRKYEEDFNPYSMFLPEQITGKDVRLLRIKKEGSLDLAVEGGVDSPVGKIV
VSAVYEDGAADRHGGIVKGDEIMAINGKIVMDFTLAEAQATLQKAWNQGGDWIDLVIAVC
PPKEYDDELTFF
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggacaggaaggtggcccgagaattccggcacaaggtggatttcctgattgaaaatgat
gctgagaaggattatctgtatgacgttctacggatgtaccacgaggccatggatgtctct
gttctggtgggtgacctgaagttggtgatcaatgaacccaatcgcctgcccctgtttgat
gctgtccggcccctgatcccgctgaagcaccaggtggaatatgatcagctgacacccagg
cgttccaggaagctgaaagaggtgcgcttagaccggacgcatcctgaaggtctgggcatt
agtgtacgtgggggcctggaatttggctgtggccttttcatatcccacctcatcaaagga
ggacaagcagacaatgtcggactccagcttggtgatgagatcgtccggatcaatggatac
tctatatcttcctgtacccatgaggaaatcatcaacctcatccgaaccaagaaaactgtg
tccatcaaagtgaggcacattggcatgatccctgtgaaaaactctcctgatgagtcactc
aagtggcagtttgtggaccagtttgtggcagagtcagggggtggaaggggtggtctgccc
tctctcgggagccgagaaaacagagaaaagaaaatcttcatcagcctggttggttctcga
ggcctgggatgcagcatttcaagtggtcccacccagaaaccgggcatctttatcagcaat
gtgaagccaggctccctgtctgcagaggttggactagagacaggagatcagattgtcgaa
gtaaatggcattgacttcaccaacattgatcacaaagaggctgtaaacgtgctaaaaagc
agtcgaagcctgaccatttccattgtagctggagctggccgggaactcttcatgacggag
cgtgagcgacaggcagaggtgaggcagcgggagctggatcggcaggagctgatgctacag
aagcgtctggccatggagtccaacaaaatccttcaagagcagcaggagaaagagagacag
agaaagaaggagattgctcagaaggctgcagaagagaatgagagatatcggaaagagata
gagcagatcacagaagatgaagaaaggttcaagaaacaatgggaagaagaatggggcaca
aaggggcaactactgatgcctaagaccatcacagctgaggtgcacccgccaccgccacgc
aagccaaaatatgaaaagggagtggagtctccgccacatgctgatgatgacctggacaga
gggaccaagaatcagcaagtgcaggacttcaggaaatatgaggaagactttaacccttat
tccatgttcctcccagagcagatcacggggaaagatgtccggcttctacgaattaaaaag
gaagggtcattagatctggctgttgaaggtggtgtcgattccccagtggggaaaatcgtg
gtgtctgccgtttatgaagatggggctgctgatcgtcatggtggcatcgtgaaaggtgat
gagatcatggcgattaacggtaagatcgtgatggacttcaccttggcagaggcccaggca
accctacagaaggcctggaaccagggcggggactggatcgatctggtcattgcagtgtgc
ccacccaaggagtacgatgatgagctgacatttttttga
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