Trichosurus vulpecula (common brushtail): 118854430
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Entry
118854430 CDS
T10126
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04068
FoxO signaling pathway
tvp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
118854430 (RAG1)
09160 Human Diseases
09163 Immune disease
05340 Primary immunodeficiency
118854430 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118854430 (RAG1)
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118854430 (RAG1)
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118854430 (RAG1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RAG1_imp_bd
RAG1_ZnH2
RAG1_RNase_H
RAG1_C
RAG1_pre-RNase_H
RAG1_ZnC2
RAG1
RAG1_DNA-bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
zf-RING_2
zf-RING_10
zf-RING_UBOX
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
118854430
NCBI-ProteinID:
XP_036620684
LinkDB
All DBs
Position
6:247961060..247964203
Genome browser
AA seq
1047 aa
AA seq
DB search
MEIPVAPSRGLSSAPDEIQHPHMKFSEWKFKLFKVRSFVKPSPGEEEGPNKNAVEGQASL
EETPAVIGSANIPAPEKPALVQPTFTVHSKSLEKPADAGKAREKAIHQASLRQLCRICGV
SFRADGQSRKYPVHGPVDSKTQGLLRKKEKKATSWPDLIAKVFKIDVKGDIDSIHPTQFC
HNCWSVMYGRFSNAPCEVYFPKNAAIEWHPHTLSCDICRVARRGLKRKGRQTNPSLSKKL
KAMANQAPRARPPKSQAQPRNSSKDLMKKITNCSKMHLSTKLLTVDYPVDFVKAVSCQIC
EHILTDPVETTCKHLFCRTCILRCLKVMGSYCPSCRYPCFPTDVESPVRSFVNILNSLAV
RCPVNDCDKEVSLEKYNQHISSHKKPKESYVYINKGGRPRQHLLSLTRRAQKHRLRELKL
QVKAFADKEEGGDLKSVCLTLFLLVLRARNEHRQADELEAIMQGRGSGLQAAVCLAIRVN
TFLSCSQYHKMYRTVKAITGRQIFQPLHALRNAEKTLLPGYHPFEWKPPLKNVSARTDIG
IIDGLSGWSASVDDYPVDTIAKRFRYDTALVSALMDMQEDILEGMKSKDLGDYLSGPFTV
VVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTIMNISITEGQESVRIFEETKPNSELCCK
PLCLMLADESDHETLTAILSPLIAEREAMKSSELLLEMGGIQRTFKFIFRGTGYDEKLVR
EVEGLEASGSVYICTLCDATRLEASQNLVLHSITRSHAENLERYEVWRSNPYQESAEELR
DRVKGVSAKPFIETVPSIDALHCDIGNAAEFYKLFQLEIGEVYKNPNASKEERKRWQATL
DKHLRKKMNLKPIMRMNGNFARKLMTKETVEAVCELIHCEERQEALRELMDLYLKMKPVW
RSTCPAKECPESLCQYSFNSQRFAELLSTKFQYRYEGKITNYFHKTLAHVPEIIERDGSI
GAWASEGNESGNKLFRRFRKMNARQSKCYEMEDVLKHHWLYTSKYLQKFMNAHNALKNPG
LIVSPQAGFEESLGLEDSLEILDSMEF
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atggaaataccagtggcaccgagtcgaggtcttagctctgcaccagatgaaatccagcat
ccacacatgaaattttctgaatggaaattcaagctcttcaaagtgagatcctttgtgaag
ccctctcctggagaagaagaggggccaaataaaaatgcagtggaaggacaggcctctctg
gaggaaactccagcagtcataggcagtgccaacattccagcaccagaaaagccagccctg
gtccagccaacattcacagtccattccaagtctttggagaagcctgctgatgctgggaag
gctcgagagaaggcaattcaccaagccagcctccggcagctttgccgtatttgtggtgtt
tcctttagagctgatgggcagagtagaaaataccctgtccatggtcctgtggacagcaaa
actcagggcctcctccgaaagaaggaaaagaaagccacctcctggccagacctgattgca
aaggtttttaaaattgatgtgaagggggatattgactccatccaccccacccaattttgc
cacaactgttggagtgttatgtatgggagattcagcaatgccccatgtgaggtatacttc
ccaaagaatgctgccatagagtggcacccacacacgctatcctgtgacatctgccgggta
gcccgccggggactcaagaggaaaggccgtcagaccaacccatcactcagcaaaaagctc
aaggccatggccaaccaggctccaagggcccgtccccccaagagtcaagctcagcctcga
aacagcagcaaggatctgatgaagaagatcaccaactgcagcaagatgcatctgagtact
aagctgctcactgtggactaccctgtggacttcgtgaaggccgtctcgtgccagatctgc
gagcacattttgactgacccggtggaaaccacctgcaaacatttattctgcagaacatgc
attttgaggtgcctcaaggtcatgggcagctattgcccttcttgtcgatacccttgcttc
cctacagatgtggaaagcccagtgaggtcctttgtgaacatcctcaattccctggcggtg
agatgccctgtgaatgactgtgacaaggaggtcagccttgaaaaatacaaccagcacatc
tccagccacaagaaaccaaaagaatcatacgtgtacattaataaaggcggccggcccagg
caacatctcctgtctctgaccaggagggctcagaaacaccgtctaagagaactgaagctg
caggtcaaggcttttgcagacaaagaagaagggggggatttgaagtcagtgtgcctgact
ttgttcctgctagtattgagagcgaggaatgagcatcgacaagcagatgagcttgaggcc
atcatgcagggtagagggtcgggccttcaggcagctgtatgcttggccatccgggtcaac
acctttctgagctgtagccagtaccacaagatgtaccggactgtcaaagccatcactggg
aggcagatcttccagcctctgcatgcccttcggaatgcggagaagactctcctgcctgga
tatcacccgtttgagtggaagccccctctgaagaatgtctctgctcgcacagacataggt
atcattgacgggctttctgggtggtctgcatccgtggatgactacccagttgacaccatt
gcaaagaggttccggtacgatacagcgctggtgtctgccttgatggatatgcaagaagac
atcctagaaggcatgaaatccaaggacttgggtgactacctgagtggccctttcacagtg
gtggtgaaggagtcctgtgatgggatgggagacgtgagtgagaagcatgggagtgggcca
gctgtgcctgagaaggctgttcgcttttcatttactatcatgaatattagcatcactgag
ggtcaggagagtgtgaggatatttgaagaaaccaagcccaattcagagctatgctgtaag
cccttgtgcctcatgctggcagatgaatctgaccatgagaccttgacagccatcctgagt
cccctcattgcagagagagaggcgatgaagagcagtgaattactgctggagatgggaggc
atccaaagaacttttaagttcatctttagaggaactgggtatgatgaaaaacttgtccgg
gaagttgaaggcctcgaggcttctggctctgtctacatctgcaccctctgtgatgccacc
aggctggaagcttcccaaaatcttgtccttcactccataactagaagtcatgcagagaat
ctggagcgttatgaagtctggagatccaacccgtaccaggagtcagcagaagagctgaga
gacagggtgaaaggggtctcagcaaagcctttcattgagacggttccttccattgatgct
ctccactgtgacatcggcaatgcagcagagttttataagctcttccagctggagattggg
gaagtttataagaatcccaatgcatccaaagaggagaggaaaagatggcaggctaccctg
gacaagcacctccggaaaaaaatgaacttgaagcccatcatgaggatgaatggcaacttt
gccaggaagctcatgaccaaggagactgtggaagccgtgtgtgagttaattcactgtgag
gaaaggcaggaggccttgagggaactaatggacctctacctgaagatgaaacctgtgtgg
cgctcaacgtgcccagccaaagagtgcccagaatcactttgccagtatagtttcaattca
cagcgttttgcagaactcctgtctaccaagttccagtatagatatgagggcaaaatcacc
aattattttcacaagacccttgcccatgtccctgagatcattgagagagatggctccatt
ggagcatgggccagtgaaggtaatgaatctggtaataaactcttccgacgtttccggaaa
atgaatgctaggcagtccaagtgttatgaaatggaagacgtcctgaaacaccattggtta
tacacctccaaatacctccagaagttcatgaatgcccataatgccttgaaaaatcctggg
ctaattgtcagcccacaagcaggctttgaagaatccctagggctagaagactcactggaa
attcttgattccatggagttctaa
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