Trichosurus vulpecula (common brushtail): 118854890
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Entry
118854890 CDS
T10126
Name
(RefSeq) E3 ubiquitin-protein ligase NRDP1-like
KO
K11981
E3 ubiquitin-protein ligase NRDP1 [EC:
2.3.2.27
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118854890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118854890
04121 Ubiquitin system [BR:
tvp04121
]
118854890
03029 Mitochondrial biogenesis [BR:
tvp03029
]
118854890
Enzymes [BR:
tvp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118854890
Membrane trafficking [BR:
tvp04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
118854890
Autophagy
Mitophagy
PINK1-Parkin associated proteins
118854890
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118854890
Mitochondrial biogenesis [BR:
tvp03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
118854890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_interact
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-RING_6
zf-C3HC4_4
zf-RING_2
zf-Nse
Sina_ZnF
zf-RING_10
zf-C3HC4_3
TMF_DNA_bd
TRAF3_RING
DUF16
SlyX
Motif
Other DBs
NCBI-GeneID:
118854890
NCBI-ProteinID:
XP_036620974
LinkDB
All DBs
Position
6:complement(204465715..204466449)
Genome browser
AA seq
244 aa
AA seq
DB search
MGYDRARFLGDVDEDLICPICHGVLEEPVQAPNCEHAFCNTCITQGSSWQQICPVDGSVV
TIPHLRPIPRIMRNMLSKLQITCNNAVSGCSAILRLDNLMTHLISCEHNPKCPVACKQGC
GLEMSSEELPNHNCIKHLHSMVQQQETHITELEKASDEQKYQLAEQKRDIQLLKAYARAL
DKGNPNFQELEDTNEYNEVIQGMNLVQPERVRSWEGGISTPDTMHQPMIKTSVESGCSVP
LPIS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgatagagcccgtttcctgggagatgtggatgaagacctcatctgccccatc
tgccatggtgttcttgaggagcctgtgcaagcgcctaactgtgagcatgccttctgcaac
acctgcatcactcaggggtcctcttggcagcagatatgccctgtggacggaagcgtggtg
acaatccctcacctgcgccctattccccgaattatgcggaacatgctgtccaaacttcag
atcacctgcaacaacgcggtctctggttgcagtgccatcctgaggcttgacaatctcatg
actcatctcatcagttgtgagcataaccccaagtgccctgtggcctgcaagcagggctgt
ggcctagagatgtccagtgaggaactgcccaaccacaactgcatcaagcacctacactcc
atggtccagcagcaagagacacacatcactgagctggagaaggcatcggatgagcagaaa
taccagctggcagaacagaaacgagacattcagctcctgaaggcctatgcccgtgccctc
gacaaaggcaaccccaactttcaggaactggaagataccaatgagtacaatgaggtcata
caggggatgaacttggtacagccagaaagggtgagaagctgggagggtgggatctccacc
ccagatactatgcaccaacccatgattaagacatcagtagaaagtggctgttcagtacca
ttgccaataagctga
DBGET
integrated database retrieval system
