Trichosurus vulpecula (common brushtail): 118855325
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Entry
118855325 CDS
T10126
Symbol
PCDH18
Name
(RefSeq) protocadherin-18 isoform X1
KO
K16499
protocadherin delta 2
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
tvp04515
]
118855325 (PCDH18)
Cell adhesion molecules [BR:
tvp04515
]
Cadherins
Protocadherins
118855325 (PCDH18)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
TMEM154
Syndecan
MPS-4
PAH
BBS1
G1_gp67_N
Cadherin_C_2
FAM176
Motif
Other DBs
NCBI-GeneID:
118855325
NCBI-ProteinID:
XP_036621297
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Position
6:117945131..117961406
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AA seq
1135 aa
AA seq
DB search
MHQMSWTMHFIAFFALLLFSFNGDVLGKNLKYRIYEEQRVGSVIARLSEDVADVLFKLPN
PTTVRFRAMQRGNSPLLTVREDNGEISIGAKIDREQLCQKNLNCSIEFDVITLPTEHLQL
FHIEVEVLDINDNSPQFSRPLIPIEISESAAVGTRIPLDSAFDPDVGENSLHTYSLSAND
FFNIEVRTRTDGAKYAELIVVRELDRELKSSYELQLTASDMGVPQRSGSSILKISISDSN
DNSPVFEKQSYVIQLLENSPVGTLLLDLNATDPDEGANGKIVYSFSSHVSPKIIETFKID
SEKGHLTLFKQVDYETTKSYEIDAQAQDMGPNSIPAHCKIIIKVVDVNDNKPEININLMS
PGKEEISYVFEGDPIDSFVALVRVQDKDSGLNGEIVCKLHGHGHFKLQKTYENNYLILTN
ATLDREKRSEYSLTVIAEDRGTPSLSTVKHFTVQINDVNDNPPHFQRSRYEFVISENNSP
GAYITSVTATDPDLGENGQVTYTILESFILGSSITTYVTIDPSNGAIYALRIFDHEEVSQ
IAFVVEARDGGSPKQLVSNTTVVLTIIDENDNVPVIVGPALRNNTAEISIPKGAESGFQV
TRIRAVDRDSGMNAELSCSIVAGNEDNIFVIDPKSCDIYTNVSMESTPHTEWELAVLVQD
KGSPQLHTKAILKCSVFEFVESVTSTAMTSVSQTSMDVSMIIIISLGAICAVLLVIMVLF
ATRCNREKKDNRSYNCRVAESTYQHHPKRPSRQIHKGDITLVPTINGTLPIRSHHRSSPS
SSPTLERGQMSSRQSHHSHQSLNSLVTISSNHVPENFSLELTHATPAVEQVSQLLSMLHQ
GQYQPRPSFRGNKYSRSYRYALQDMDKFSLKDSGRGDSEAGDSDYDLGRDSPIDRLLGEG
FSDLFLTDGRIPAAMRLCTDECRILGHSDQCWMPPLPSPSSDYRSNMFIPGEEFPSQPQP
QHPHQSVEEESQPIDSSEKKKSFSTFGKDVRNEEDAGDTCTSSLLSEMSSVFQRLLPPSL
DTYTECSEVDRANSLERRKGTLPAKTVGYPQGVAAWAASTHFQNPANTTGPTLGTHSSVQ
PSSKWLPAMEEIPENYEEDDFDNVLNHLNDGKHELMDASELVAEINKLLQDVRQS
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaaatgagttggacgatgcactttattgccttttttgcactgttgctgttctct
ttcaatggagacgtgctgggcaagaatttgaaatacaggatttatgaagaacagagggtt
ggctcggtcatagcgagactctcggaagatgtggctgatgttttatttaagctccctaac
ccgactacggtgcgtttccgagcaatgcaaagggggaattctcctttactcacagtccga
gaggataacggggaaatcagcataggggcgaaaattgaccgggaacaactctgccagaaa
aacttgaactgttccatcgagtttgatgtgatcactctgcccacggagcatctgcagctt
ttccacattgaagtggaggtactggacattaatgacaattctccccagttttcccgacct
ctcattcccattgagatatccgagagcgcagctgtagggacccggatccccttggacagc
gcgttcgatccagatgttggggagaactctctccacacgtactctctgtctgctaatgac
ttttttaatatcgaggtgcgtactaggacggatggggcgaaatatgcggagctcattgtg
gtgagagaattggatagggaactgaagtccagctatgaactccagctcactgcctctgat
atgggagtgcctcagaggtctggatcttccatcctcaaaataagcatttcggactctaat
gacaacagtcctgtttttgagaaacaatcttatgtaatacagctgttggagaactccccg
gtggggactttgctcctagacctgaatgccactgatccagatgagggcgctaatgggaaa
attgtgtattccttcagcagtcatgtgtctcccaaaattatagagacttttaagattgat
tctgaaaaaggccatttgactcttttcaagcaagtggactatgaaaccaccaaatcctat
gaaattgatgctcaggctcaggatatgggccccaattcaattccagctcactgcaaaatc
atcattaaggttgtagatgtgaatgacaataagcctgaaattaacataaacctgatgtct
cctggcaaagaggaaatatcttatgtttttgaaggggatcccattgactcatttgttgct
ttggtcagggtacaagacaaggattctggactgaatggagaaatagtttgcaaacttcat
ggacatggtcactttaaacttcagaagacctatgaaaacaattatttgatcttgactaat
gccacactggacagagaaaagagatccgaatatagtttgactgtaattgcagaggacagg
ggaacccctagtctctcaacagtgaaacatttcactgtccaaatcaatgatgtaaatgac
aatcccccccatttccagagaagcagatatgaatttgtcatctctgagaataattctcca
ggggcctatatcacttctgtcacagccactgatcctgacctaggagaaaatggacaggtc
acctataccattttggagagttttatcctgggaagttccataactacatatgtaaccatt
gacccatctaatggcgccatctatgccctcagaatctttgatcatgaagaagtaagtcag
attgcttttgtggttgaagccagagatgggggaagtccaaaacaactcgtcagcaatacc
acagttgtactcactatcatcgatgaaaatgacaatgtccctgtgattgtaggccctgca
cttcgaaataacacagcggaaatctcaatccctaaaggggctgaaagtggcttccaagtt
accagaataagggctgtagaccgggactctggcatgaatgcagaactaagctgctctata
gtagcagggaatgaagacaatatcttcgtcatagaccccaaatcatgtgacatctacacc
aatgtaagcatggagtccaccccacacactgaatgggagcttgctgtactagtccaggat
aaaggcagtccccagctccataccaaagcaattttgaagtgttcagtttttgagtttgtt
gaatcagtaacaagtacagcaatgacctcagttagtcagacctctatggatgtctctatg
ataataattatctccttgggagctatctgtgctgtcttattggtcatcatggtcctcttt
gcaacccggtgcaacagagaaaagaaagacaaccggtcctacaactgtagggtggcagaa
tctacttaccagcaccatcccaaaagaccctccagacagattcacaaaggagatatcact
ctagtgcctacaattaatggcactttgcccattagatcccatcataggtcatctccttct
tcttctcccaccctggaaagagggcagatgagcagtcgtcagagtcaccacagccatcag
tcactcaatagcttagtgacaatctcctcaaaccatgtgcctgagaatttctcattggaa
ctcactcatgctactcctgctgttgagcaggtctctcagcttctctcaatgcttcatcaa
ggtcaatatcagccacgaccaagttttcggggaaacaaatactccaggagctatagatat
gcccttcaagatatggataaattcagcttaaaggacagtggccggggtgacagtgaagca
ggggacagtgattatgatctgggtcgtgattctccaatagaccggctacttggggaaggt
ttcagtgacctcttcctcaccgatggaagaattcctgcagcaatgcggctatgcacggat
gaatgcagaattttgggacactcagaccagtgttggatgccgcctcttccctccccatct
tctgattatcgaagcaacatgttcattccaggagaagaatttccttcccagccacaaccc
cagcacccccatcagagtgtggaagaggaatcccagcccattgattccagtgaaaagaag
aagagtttttccacttttgggaaggatgtgcggaatgaagaagatgctggggacacatgc
acatcttctttgctctctgaaatgagtagtgtgtttcagcgtctgttacctccatctctg
gacacctacactgagtgcagtgaggtggatcgggccaactcattagagcgtcgaaaggga
actctcccagccaaaactgtgggttacccacaaggggtggcagcctgggcagccagtacc
catttccaaaatcctgccaacaccacggggcccaccctggggactcactcgagtgtgcag
ccttcttccaaatggcttccagccatggaagagattcctgaaaactatgaggaagatgat
tttgataatgtactcaaccatctcaatgatgggaagcatgaactcatggatgccagtgag
ctggtggcagagattaacaagctgctacaagatgttcgacagagctag
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