Trichosurus vulpecula (common brushtail): 118855885
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Entry
118855885 CDS
T10126
Name
(RefSeq) cullin-4B-like
KO
K10609
cullin 4
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03420
Nucleotide excision repair
tvp04120
Ubiquitin mediated proteolysis
tvp05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118855885
09124 Replication and repair
03420 Nucleotide excision repair
118855885
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
118855885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tvp04121
]
118855885
03400 DNA repair and recombination proteins [BR:
tvp03400
]
118855885
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tvp04147
]
118855885
Ubiquitin system [BR:
tvp04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
118855885
DNA repair and recombination proteins [BR:
tvp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
118855885
TCR (transcription coupled repair) factors
Cul4-CSA complex
118855885
Exosome [BR:
tvp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118855885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
Motif
Other DBs
NCBI-GeneID:
118855885
NCBI-ProteinID:
XP_036621814
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All DBs
Position
7:1334398..1337119
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AA seq
887 aa
AA seq
DB search
MFPTGFSSPNPPGAAAPPQEVRPATEGHDSTNPTLATFTSYSKKRKLNNSSSSSNPKEDF
DPIPCSCSSPPPKNSSLASCPRISVAAPNHHQLQKKLHLVDSLDFIGLDVKMAEEQASSS
SSPGLAVSQQQELNKNLLISSVAKGHHANELTKAPTTTTSFTNSKSGSAKKLVIKNFKDK
PMPENYTDEIWQKLKEAVAAIQNSTSIIYNLEELYQAVENLCSYRIAANLYKQLRQICEE
HIRSQIHQFQEDSLDGVLFLRKIDECWHTHCRQMSMIRSIFLFLDRTYVLQNSMLPSIWD
MGLELFRTHIISDQKVRNKTIEGILILIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFE
QKFLEETNRLYAAEGQRLMQEREVSQYFHHVNRRLGEEEDRLITYLDLSTQKPLIAIVEK
QLLGEHLIAILQKGLSTLLDENQTQDLTLLYQLFSRVCNGIPVLLQHWIEYIKAFGSTIV
INPEKDKTMVQELLDFKDKVDHIIDISFMKNERFVNATKEAFETFINKRPNKPAELIAKF
VDSKLRAGNREATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLVKRLLFGKSASADAE
KSMLSKLKHECGAMFTSKLEGMFKDIELSKDIMVQFKQYVQNQNFPVSTELTVNILTMGH
WPTYLPMEVHLPAELVRLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVS
LFQTLVLLMFNDGEEFSVEDVKQATGIEQAELRRTLQSLACGKARVLMKNPKGKDVEDGH
KFTCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQHHIDAAIVRIMKIRKALDH
NLLLSEAYNQLRFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtttccaacaggtttctcatctcccaaccccccaggtgctgctgctcctccccaggag
gtcagacctgccactgaaggtcatgacagcaccaaccctaccttggccaccttcacctcc
tattccaagaaaagaaagttaaacaacagcagcagcagcagcaacccaaaagaagacttt
gatcccatcccttgttcctgctcctccccaccccccaagaactcctctctagcctcttgt
ccaaggatttcagttgctgcccccaaccatcaccagctccagaagaaactgcatttggta
gactccttggattttataggacttgatgtgaagatggccgaggaacaggcatcttcttct
tcttcacctggtcttgctgtatctcagcagcaggaacttaacaaaaacttattaatttcc
tctgtggctaaagggcaccatgcaaatgagctgaccaaagcacccactactaccactagc
ttcaccaacagcaaatcaggctcagccaagaaactggtgatcaagaactttaaagacaaa
cctatgccggaaaactatacagatgaaatttggcagaaactgaaagaagcagtggcagcc
attcagaacagcacttcaattatatacaatttagaagaactctatcaggctgttgaaaac
ctctgttcctacaggattgctgcaaacttatataaacagctgagacagatctgtgaagag
cacatcagatcccaaattcaccagttccaggaggattcactagatggtgttctgtttcta
aggaagatagatgaatgctggcatactcactgcagacaaatgtccatgattaggagcatt
tttttgttcctggacagaacgtatgttcttcagaattcaatgctgccttccatttgggac
atgggtctagaattatttaggacccacataattagtgatcagaaagtccggaacaagact
attgaaggcattctcattttgattgagagggaaaggaatggtgaagcaattgatagaagt
ttgcttcgaagccttctgagtatgctttcagacttacagatttatcaagattcttttgaa
cagaaatttttggaagaaaccaaccggctatatgcagcagagggtcagcgtttaatgcaa
gaaagagaggtttctcaatactttcatcatgtcaacagacgtctaggagaagaagaagac
agactgattacctatcttgatctgagtacccagaagccactaattgctattgtagaaaag
caacttctaggtgaacacttaatagccatccttcagaaaggcttaagtacccttctagat
gaaaatcagactcaagatttgactctgctctatcagctgttcagtagggtatgcaatggg
attcctgttctcttgcagcactggattgaatacatcaaggcatttggcagtactattgtc
attaatcctgaaaaagataagaccatggtgcaagaattgctggattttaaagataaagtt
gaccatattattgacatcagctttatgaaaaatgaaaggtttgtcaatgccacgaaagaa
gcatttgaaaccttcattaacaaaagaccaaataagcctgctgaactcatagcaaagttt
gtggattcaaagctccgtgcaggtaacagagaagctacagatgaagaacttgagaaaatg
ttggacaagatcatgattatatttcgattcatttatgggaaagatgtctttgaagccttt
tataagaaggatttagtcaaaagactgttgtttggaaagagtgcatctgcagatgctgaa
aaatcaatgctttccaaactcaagcatgaatgtggagccatgttcaccagcaaactggaa
gggatgttcaaagacatagagctatccaaagatatcatggttcagttcaaacagtatgtg
caaaaccaaaactttcctgttagcactgaactaactgtgaatatcttgacaatgggtcac
tggccaacctacctgcctatggaggttcacctaccagctgagctggtaagactccaggag
attttcaagactttttacttaggtaaacacagtgggaggaagcttcagtggcaatcaaca
ttaggacattgtgtactaaaggcagaatttaaagaggggaaaaaggaactccaggtctct
cttttccagacgctggtgttgttaatgtttaatgatggtgaagaattcagtgtagaagat
gtcaagcaagctacaggaatagagcaggcagaattaaggagaacacttcagtcattagcc
tgtggcaaagctagagttctgatgaaaaatccaaagggcaaagatgtggaggatggtcat
aaatttacttgcaatgatgacttcagacacaaactcttcaggataaaaatcaaccaaatc
cagatgaaagaaacagtagaggaacaagccagcactacagaaagggtcttccaggaccga
cagcatcacattgatgctgcaattgtgagaatcatgaagattagaaaggctctagatcac
aatctgcttctttcagaagcatataaccagttgaggttcccagttaagcctgctgatctg
aagaagagaatagaatccttaatcgatagggattacatggaaagagacaaagaaaacccc
aaccagtacaactacattgcctaa
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