Trichosurus vulpecula (common brushtail): 118856128
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Entry
118856128 CDS
T10126
Symbol
ARID1B
Name
(RefSeq) AT-rich interactive domain-containing protein 1B isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03082
ATP-dependent chromatin remodeling
tvp04714
Thermogenesis
tvp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118856128 (ARID1B)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
118856128 (ARID1B)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
118856128 (ARID1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118856128 (ARID1B)
03021 Transcription machinery [BR:
tvp03021
]
118856128 (ARID1B)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118856128 (ARID1B)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Helix-turn-helix
ARID
118856128 (ARID1B)
Transcription machinery [BR:
tvp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118856128 (ARID1B)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118856128 (ARID1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118856128
NCBI-ProteinID:
XP_036622123
LinkDB
All DBs
Position
7:complement(98107379..98670543)
Genome browser
AA seq
1833 aa
AA seq
DB search
MSPGNTGQTINRSQGSPMDPMVMKRPQLYGMGNNPHSQPQQSSPYPGGSYGPPGPQRYPI
GIQGRTPGAMGGMQYPQQQMPPQYGQQGVSGYCQQGQQPYYNQQPQPQHLPPQAQYLSTQ
PQQRYQTQQDMSQEGYGTRSQPPMAPGKPNHEDLSLIQQERPSSLPDLSGSIDDLPTGTE
ATLSSAVSASGSTSSQGDQSNPAQSPFSPHASPHLSSIPGGPSPSPVGSPVGSNQSRSGP
ISPASIPGSQMPPQPPGSQSESSSHPALSQSPMPQERGFMTGTQRNPQMSQYGPQQTGPS
MSPHPSPGGQIHPGITSFQQSNSSGAYGPQMSQYGPQGNYSRPPTYSGVPSASYSGPGPG
MGINANNQMHGQGPSQPCGTMPLGRMPSTGMQSRPFPGNMSSMTPNSPGMAQQGGPGMGP
PMPTVNRKAQEAAAAVMQAAANSAQSRPPYIRSPAYPSQSGAGGRPMFSSQHPNYGNAQA
PMMHQPDQYGQGSFPGMNQSGLMGSSSPYSQPMNNSSSLMNPQAPPYSMTPNMVNSSTAS
MGLADMMSPGESKLPVPLKTDGKEEGPPQAESKSKDSYSSQGISQPPTPGNLPVPSPMSP
SSASISSFHGDESDSISSPGWPKTPSSPKSSSSTTTGEKITRVYELGNEPERRLWVDRYL
TFMEERGSPVASLPAVGKKPLDLFRLYVCVKEIGGLAQVNKNKKWRELATNLNVGTSSSA
ASSLKKQYIQYLFAFECKIERGEEPPPEVFSTGDTKKQAKIQPPSPANSGSLQGPQTPQS
TGSNSMAEVPGDLKPPTPASTPHGQMTPMPGGRNSAVSVHDPFSDVSDSSFPKRNSMTPN
APYQQGMNIPDMMGRMPYEPNKDPFGGMRKVSGSNEPFMTPGQMPNSGMQDMYNQAPAGA
MSNMGMGQRQQFPYGASYDRRHEPYGQQYPGQGPPSGQPPYGAHQPGIYPQQPNYKRHMD
GMYGPPAKRHEGDMYNVQYGSQQQEMYNQYGSTYSGPDRRPIQGQYPYPYNRERMQGPGQ
MQQHGIPPQMIGGPMQSSSTEGPQQNMWPTRNDMPYPYQNRQGPGGPAQAPPYPGMNRTD
EMMVPDQRINHESQWPSHVNQRQPYMSSSASMQPITRPQSSYQTTPSMPNHISRAPSPAS
FQRSLENRMSPSKSPFLPSMKMQKVIPAVPASQVTGPPPQPPPIRREITFPPGSVEASQP
VLKQRRKITSKDIVTPEAWRVMMSLKSGLLAESTWALDTINILLYDDSTVATFNLSQLSG
FLELLVEYFRKCLIDIFGILMEYEVGDPSQKALDHNANKKDDGQSLADDSGKEEEEAECI
DYYDDEDEDEEEEDEDDEKTGAEDKSMVFASPDASVDPKERPKQASKFDKLPIKIVKKNN
LFVVDRSDKLGRVQEFNSGLLHWQLGGGDTTEHIQTHFESKMEIPPRRRTLPALSSLGKK
KDLEGRSEFEEHPEKSIIATIDDVLSARPGALPEDSNPSNQTESSKFPFGIHEAKSHRNI
KLLEDEPRSRDETPLCTIAHWQDSLAKRCICVSNIVRSLSFVPGNDAEMSKHPGLVLILG
KLILLHHEHPERKRAPQTYEKEEEEDKGVTCSKNEWWWDCLEVLRDNTLVTLANISGQLD
LSAYTESICLPILDGLLHWMVCPSAEAQDPFPTVGPNSVLSPQRLVLETLCKLSIQDNNV
DLILATPPFSRQEKLYATLVRYVGDRKNPVCREMSMALLSNLAQGDALAARAIAVQKGSI
GNLISFLEDGVTMAQYQQSQHNLMHMQPPPLEPPSVDMMCRAAKALLAMARVDENRSEFL
LHEGRLLDISISAVLNSLVASVICDVLFQIGQL
NT seq
5502 nt
NT seq
+upstream
nt +downstream
nt
atgagccctggaaacactggacagaccattaacagatcccagggcagtccaatggatcca
atggtaatgaagagacctcagttgtatggaatgggcaataatcctcattctcagcctcag
caaagcagtccatacccggggggatcatatggtccccctggcccacagcggtatccaatt
ggaatccagggacggaccccaggtgccatgggaggaatgcaatatccacagcaacagatg
ccgcctcagtatggtcagcaaggtgtaagtggttactgccaacagggccaacaaccatat
tacaaccagcaaccacaacctcagcacctaccaccccaggcgcagtatctgtcaacacag
ccccagcagaggtaccaaacacagcaggacatgtctcaggaaggctatggaaccagatct
caacctcctatggcaccaggaaagcctaaccatgaagacttgagcctaatacagcaagaa
agaccatcaagtttaccagacttatctggctccattgatgacctgcccacaggaacagaa
gcaacattgagttcagcagtgagtgcgtcaggctccactagcagccaaggggatcagagc
aatcctgcacagtcacccttctctcctcatgcctccccccatctttccagtattccagga
ggcccatcaccttcccccgtcggctctcctgtcgggagcaaccagtcaagatcgggccca
atttctcctgcgagtattccaggcagtcagatgccacctcagcctcctggtagccaatca
gaatccagttcccatccagccttgagccagtcaccaatgccacaggaacgaggtttcatg
acaggcacacaaaggaaccctcagatgtctcaatatgggcctcaacaaactggaccatct
atgtcacctcatccttcccctggaggacagatccatcctggaatcactagctttcaacag
agtaactccagtggggcttatggtcctcagatgagccaatatggaccacaaggtaactac
tccagacctccaacatatagtggggtacccagtgcaagctacagtggcccagggcctggc
atgggtatcaatgccaataaccagatgcatggacaagggccaagccagccatgtgggacc
atgcccctgggacggatgccatcaactgggatgcagagcagaccatttcctggaaacatg
agcagtatgacacccaattctcctggcatggctcagcaaggaggacccggaatgggcccc
ccaatgccaactgtgaaccgtaaggcacaggaggccgcagctgcagtgatgcaagctgct
gcaaactcagctcaaagcaggccaccatacattaggtcgcctgcttatcccagccagtct
ggggctggcggacgtcccatgttttcttcccagcaccccaactatggcaacgctcaggct
cctatgatgcaccagcctgaccagtacgggcaaggcagttttcctggcatgaatcaaagt
ggacttatgggctccagctctccttatagccagcccatgaacaacagttccagcctgatg
aacccacaagcccctccttacagcatgacccccaacatggtgaatagttcaacagcatct
atgggtcttgcagatatgatgtcacctggtgagtccaaattgcccgtgcctctcaaaaca
gatggtaaagaagaaggccctcctcaggctgagagcaagtcaaaggatagctacagctct
cagggtatttctcagcccccaaccccaggcaacctgccagtcccttccccaatgtcccca
agctctgctagcatctcctcatttcatggagatgaaagtgatagcattagcagcccaggc
tggccaaagactccatcaagccctaaatcaagctcttctacaaccactggggagaagatc
acaagagtgtatgagctggggaacgagccggagcgcaggctgtgggtggacagatacctg
accttcatggaggagcgaggctcacctgtggccagtctgccagcagtgggcaaaaagccc
ctggacctgttcagactctatgtctgcgtcaaagagattggaggcttggcacaggttaat
aaaaacaaaaagtggcgcgagctggccaccaacctgaatgtgggcacttcgagcagtgca
gccagctccctgaaaaagcagtatattcaatacctgtttgcctttgagtgcaagattgaa
agaggggaggagccccctcccgaagtcttcagcactggagatactaagaaacaagctaag
attcagccgccatctcctgctaactcgggatccttacaaggtccacagaccccccagtca
actggtagtaactctatggcagaagttccaggtgatctgaagccacccacaccagcctct
acacctcatggacagatgacaccaatgccaggtggcaggaacagtgcagtcagcgtgcat
gaccctttctcggatgtgagtgattcctcattccccaaacggaactccatgacaccaaat
gcaccataccagcagggcatgaacattccagatatgatgggaaggatgccctatgaacct
aacaaggacccctttggtggaatgagaaaagtgtctggaagcaatgaacccttcatgaca
ccaggacagatgcctaatagtgggatgcaggacatgtataaccaagccccagcaggagcg
atgtccaacatgggaatgggccaacggcagcagtttccctacggggccagttacgacaga
aggcatgaaccttatggacagcagtatcctggacaaggacctccctcaggacagccaccc
tatggagcacaccagcctggaatatatccacagcaaccgaactacaaacgtcacatggat
ggcatgtatgggcccccagcaaaacgccatgagggagacatgtataatgttcagtatggc
agccagcagcaagaaatgtataaccagtatggtagtacttactctggaccagacaggagg
cccatccagggacagtatccatatccttacaacagagaacgaatgcagggcccaggtcag
atgcagcaacatggtatacctcctcagatgattggtggccccatgcaatcatcctcaacc
gagggtcctcagcagaatatgtggccaacacgaaatgatatgccttatccataccagaac
aggcaaggtccaggaggccctgcacaggctcccccttatccaggaatgaaccgcactgat
gaaatgatggtacctgatcagaggataaaccacgagagccagtggccttctcatgtcaac
caacggcagccttatatgtcatcttcagcctccatgcagcccatcactcgacctcagtca
tcctaccagacaacaccgtcgatgccaaaccacatctccagggctcccagcccagcatct
ttccaacgctccttagagaaccgcatgtctccaagcaaatctcccttcttgccctccatg
aagatgcagaaggttatacccgcagttccagcatcacaggtcacagggccaccaccccag
ccacccccaattcgacgagagatcacctttcctccggggtccgtagaagcatcacaacct
gtcttgaaacaaagacgaaagattacctcaaaagatattgttactcctgaggcctggcgt
gtaatgatgtccctgaaatcgggccttttggctgaaagcacgtgggctttggacactatt
aatatccttctctatgatgatagcaccgtggctacattcaatctctcccagttatcggga
tttcttgagcttttagtagagtactttagaaaatgcctgattgacatctttggaattcta
atggaatatgaagtgggagaccccagtcaaaaagcccttgatcacaacgcaaataagaaa
gacgatggtcagtctttggcagatgactctggaaaggaagaagaagaagctgaatgtatc
gattattacgatgatgaagatgaggacgaggaggaggaagatgaagacgatgagaagaca
ggagcagaagataagagcatggtttttgcctctcccgatgccagtgttgatccaaaagag
aggccaaagcaagcaagtaaatttgacaaactgccaataaagatagtaaagaagaataat
ctgtttgttgttgaccgatctgacaaactaggccgtgttcaggaattcaacagtgggctt
ctccactggcagcttgggggaggtgacacaaccgagcatatccagactcacttcgagagc
aagatggaaattcctcctcgcaggcggacactgcctgccctcagctccctgggaaaaaag
aaagatctggaaggtagaagtgaatttgaggagcatccagagaaaagcataatagcaacc
atcgatgatgtcttgtcagctcggcctggagcattgcccgaagactcgaaccctagtaac
cagaccgaaagcagtaaatttccctttggtatacatgaagccaaaagccaccggaatatt
aaactgcttgaggatgagccaaggagccgagatgagactccactatgcaccattgcccac
tggcaggactctttggccaagcgctgtatctgtgtgtcaaatatcgtccgtagcttgtct
tttgtgcctggcaatgacgccgaaatgtccaaacatccaggcctggtgctgatcctgggg
aagctgattcttcttcaccatgaacatccagagagaaaacgggcgccccaaacctatgaa
aaagaggaagaggaggacaaaggggtgacctgcagcaagaatgagtggtggtgggactgc
ctcgaggtcttaagggataatacattggtcacattagccaacatttctgggcagctagac
ttgtctgcttacacggaaagtatctgcttgccaattttggacggcttgctacactggatg
gtgtgcccatccgcagaggcgcaggatccctttcccactgtgggacccaactcagtgctg
tcgcctcagagacttgtgctggagaccctgtgtaagctcagcatccaggataataatgtg
gaccttatcttggccacccctccgttcagccgtcaggagaaactctacgctactctagtt
aggtacgttggagaccgcaaaaacccggtctgccgagaaatgtccatggcgctcttatcg
aaccttgcccaaggggatgcgttagcagcaagggcgatagctgtgcagaagggaagcatc
ggaaacttgataagcttcctagaggatggggtcactatggcccagtaccagcagagccag
cataacctcatgcacatgcaacctccacctctggaaccacctagcgtagacatgatgtgc
agggcggccaaggccttgctggccatggccagagtggacgaaaaccgctcagagttcctt
ttgcacgagggccgtttgctggatatctcgatatcagctgtcctgaactctctggttgcc
tctgtcatctgtgatgtactctttcagattgggcagttatga
DBGET
integrated database retrieval system
