Trichosurus vulpecula (common brushtail): 118856171
Help
Entry
118856171 CDS
T10126
Symbol
SUPT6H
Name
(RefSeq) transcription elongation factor SPT6 isoform X1
KO
K11292
transcription elongation factor SPT6
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tvp03021
]
118856171 (SUPT6H)
03036 Chromosome and associated proteins [BR:
tvp03036
]
118856171 (SUPT6H)
Transcription machinery [BR:
tvp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
118856171 (SUPT6H)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
118856171 (SUPT6H)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
HHH_3
S1
HHH_9
S1_RRP5
Tex_YqgF
SH2
Tex_N
Motif
Other DBs
NCBI-GeneID:
118856171
NCBI-ProteinID:
XP_036622192
LinkDB
All DBs
Position
7:complement(35996458..36029225)
Genome browser
AA seq
1726 aa
AA seq
DB search
MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEEDDEEEEEENLDDQDEQGNLKGFIND
DDDEEEEEEDEASDSGDSEDDVGHKKRKRTAFDDRLEDDDFDLIEENLGVKVKRQKFRRV
RKMSDDEDDEEEEYGKEEHEKEAIAEEIFQDGEGEEGQEAVEAPMAAPEEEEEEDEESDI
DDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFGVDFDYDEFEKYNEYDEELEEEYE
YEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSELESSHLTDQDNEIRATDLPERFQLR
SIPVKAAEDDELEEEADWIYRNAFATPTISLQESSDYLDRGQPVSSFSRKGPSTIQKIKE
ALGFIRNQHFEVPFIAFYRKEYVEPELHINDLWRVWQWDEKWTQLKIRKENLTRLFEKMQ
AYQYEQISADPDKPLADGIRALDTTDMERLKDVQSMDELKDVYNHFLLYYGRDIPKMQNA
AKASRKKLKRTREDGDEEEGEGEEVEDEQKGPELKQASRRDMYTICQSAGLDGLAKKFGL
TPEQFGENLRDSYQRHETEQFPAEPLELAKDYVCSQFPTPEAVLEGARYMVALQIAREPL
VRQVLRQTFQERAKVNITPTKKGKKDVDEAHYAYSFKYLKNKPVKELRDDQFLKTCLAEE
EGLLTIDISIDMKGVEGYGSDQTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFL
YVQMAKELKNKLLAEAKEFVIKACSRKLYNWLKVAPYRPDQQVEEDDDFMDENQGKGIRV
LGIAFSSARDHPVFCALVNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLL
NKKPHVVTIAGENRDAQMMIEDVKRIVHELDQGQQLSSIGVEMVDNELAILYMNSKKSEA
EFRDYPPVLRQAVSLARRIQDPLIEFAQVCSTDEDILCLKFHPLQEHVVKEELLNALYCE
FINRVNEVGVDVNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMC
HMGPKVFMNCAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAE
DANPAGALEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAY
RSPNTEEVFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFC
QQDNFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGM
TVHCRIMKIDIEKFSADLTCRTSDLMDKNNEWKLPKDTYYDFDAEAADHKQEEDAKRKQQ
RTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIYQHV
DVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQECGGGDRK
KLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVSVTPEGFRYRGQVF
PTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAVNALPQNMTS
QMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQPVATPLMTPSY
SYTTPSQPITTPQYHQLQANTTPQSTQAQAQPQPSSSSRHRQQPKSNSHAAIDWGKMAEQ
WLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
NT seq
5181 nt
NT seq
+upstream
nt +downstream
nt
atgtcggattttgtggagagtgaagcagaggaatccgaggaagagtacaatgatgaggga
gaggtggtgcctcgggtcaccaagaagtttgtggaagaagaagaagatgatgaagaagag
gaggaggagaacctggatgaccaggatgaacaggggaacctgaaaggcttcatcaacgat
gatgatgatgaagaggaagaagaagaagatgaggccagtgattcaggggactcggaggat
gatgtgggacacaaaaagcggaagcgcacagcttttgatgatcgcctggaagatgatgac
tttgaccttatcgaagaaaacttgggagtcaaagtcaaacgacaaaagttcaggcgtgta
cggaagatgtcagatgatgaggatgatgaggaggaagaatatggaaaggaggagcatgag
aaagaggccattgccgaggaaatctttcaagatggtgaaggagaagagggacaggaggct
gtggaggcacccatggctgcgccagaggaggaggaggaagaggatgaagaatcagatatt
gatgacttcatagtggatgatgatggacagcctcttaagaagcccaaatggaggaaaaaa
cttccaggctacacagatgcggccctgcaggaggcccaggaaatctttggggtagacttt
gattatgatgagtttgagaagtacaatgaatatgacgaggagctagaggaggagtacgag
tatgaggatgatgaagctgaaggcgagatccgtgtgcgacccaaaaagaccaccaaaaag
agagttagccggcgaagcatttttgagatgtatgaacccagcgagctggagagcagccac
ctcacagaccaggataatgagatccgtgccactgatctgccagagaggttccagttgcgt
tccatccctgtcaaggctgctgaagatgatgagctggaagaggaagctgactggatttat
agaaatgcctttgccacgccaaccatttcactccaggaaagctctgattacctggaccgt
gggcagccggtcagcagcttcagtcgtaaaggccctagcactatccagaagatcaaagag
gccctgggcttcatccgcaatcagcattttgaggtacctttcatcgccttctacagaaag
gagtacgtagaacctgagctgcacatcaatgacctgtggagggtgtggcagtgggatgaa
aagtggacgcagttaaagatccgaaaagagaacctgactcggctttttgagaagatgcag
gcctatcagtatgagcagatatctgctgacccagacaagcctctggccgacggcatccgg
gcactggacaccacagatatggagagattgaaagatgttcagtcgatggatgagctgaag
gatgtctacaaccacttcttactatactacgggcgtgacatcccgaagatgcagaatgct
gccaaggccagccggaagaagttaaagcggacccgggaggatggagatgaggaggaaggc
gaaggggaagaagtagaggacgaacagaagggcccagaactcaagcaggcctcccgccga
gacatgtacaccatctgtcaaagtgccggcctagatggcttggccaagaagtttgggctc
accccagaacagtttggggagaacctccgggacagctatcagcggcatgagacagagcag
ttccctgctgagcccttggagctggcaaaagactacgtgtgcagccagttccccacccca
gaggcagtgctagagggtgctcgctacatggtggctctgcagattgcccgggagcccctt
gtccggcaggtgcttcgacagaccttccaggagagggctaaagttaacatcactccgacc
aagaaggggaagaaggatgtggatgaggcccattatgcctactctttcaaatatctgaag
aataagcctgtgaaggagcttcgagatgaccagttcctcaagacctgcctggctgaagag
gagggactgctcaccattgatatcagcatcgacatgaaaggagtagagggctatggtagt
gaccagacctactttgaggagatcaagcagttctactaccgagatgagtttagccaccaa
gtgcaggagtggaaccggcagcggactatggccatcgagcgggccctgcagcagttcctc
tacgtgcagatggccaaagagctcaagaacaaactgctggccgaagccaaggagttcgtc
attaaggcttgtagccggaaactgtacaattggctaaaagtggccccctaccgacctgac
cagcaggtagaagaggatgatgactttatggatgagaaccaagggaaaggcatccgagtc
ctggggattgccttctcctctgccagagaccaccctgtgttctgcgccttggtcaatgga
gagggagaagtaacagatttcctacggctgcctcactttaccaaacggaggactgcatgg
agggaagaggaacgggaaaaaaaggctcaggacattgaaacgctcaagaaattccttctg
aacaagaaaccacatgtggtaaccattgcaggcgagaacagagatgcccagatgatgatt
gaagatgtgaagcggattgtgcatgaacttgaccaaggccagcagctgtcatccattgga
gtggagatggtagacaatgaactggccatcctgtatatgaacagcaaaaagtccgaggcg
gagttcagagattaccccccagtcctgaggcaggcagtgtctctggctcgacggatccag
gatcccttgattgagtttgcacaggtgtgcagcacagatgaggatattctttgtcttaag
tttcatcccttgcaggaacacgtggtaaaggaggagctgctcaatgctctgtattgcgag
ttcatcaatcgagtcaatgaagttggtgttgatgttaaccgagcaatcgcccacccctac
agccaggccttgatccagtatgtctgtggcttggggccacgcaaagggacccatctactc
aaaattctgaaacagaacaatactcgcctggaaagccggacccagctggtcaccatgtgc
cacatggggcctaaggtcttcatgaactgtgctggtttcctcaagatagacacagcctct
ttgggtgacagcaccgactcatatattgaggttttggatggctcccgggtccatcccgag
acatatgagtgggccaggaagatggcagttgatgccctggaatatgatgagtctgctgag
gatgccaaccctgcaggggcattagaagagatcctggagaacccagaacgactcaaggac
ctagaccttgatgcctttgctgaagagctcgagaggcagggctatggtgataaacacatc
actctgtatgacatccgtgccgagctgagctgcaggtacaaggatctccgcacagcttac
cgctctcccaacactgaggaggtcttcaacatgctgactaaggaaacaccagaaaccttc
tacatcggaaagctgatcatttgcaatgtaactgggattgcccatagacgaccgcaaggc
gagagctatgaccaggcaatccgcaatgatgagacagggctgtggcagtgtcccttttgc
cagcaggacaatttccctgagctgagtgaggtctggaaccactttgatagcggctcatgc
ccaggccaggccattggtgtcaagacccgactggataatggggttactggctttatccct
acaaagtttctcagtgacaaggtggtgaagcggcctgaggagcgggtaaaggtggggatg
actgttcactgccgcatcatgaagatcgacattgagaagttcagcgcagacctgacctgc
cgcacctcggacctcatggacaagaacaacgagtggaaactgcccaaagacacttactat
gactttgatgctgaagcggccgaccacaagcaggaagaagacgccaagaggaagcagcag
aggaccacatacattaagcgggtgattgcacatccatcgtttcataatattaactttaag
caagcagaaaagatgatggagaccatggaccagggcgatgtgattattcggccaagcagt
aaaggagagaaccacctaacggtgacctggaaggtcagcgatggcatctatcagcacgtg
gatgtccgggaggagggcaaagaaaatgcctttagcctgggtgccaccctgtggatcaat
agtgaggagtttgaggacctagatgagattgttgcccgatatgtccagcccatggcatcc
tttgctcgagatcttcttaaccacaagtattaccaggagtgtggtggtggggatcgcaag
aaactggaggagctgctcatcaaaaccaagaaggagaagcccaccttcattccctacttc
atctgtgcctgtaaggaactgcctggcaaattcctgctggggtaccaaccccggggtaag
ccaaggatagaatatgtcagtgtgactccagaaggtttccggtaccgaggccaggtcttc
cccactgtgaatgggctcttccgatggtttaaggatcattaccaagaccctgtgccaggc
atcacgcccagcagcagcagcaggacaagaacgccggcctccatcaatgccacccctgcc
aacatcaaccttgcagatctgaccagagcagtgaatgccctgccccagaacatgacctca
cagatgttcagtgccattgctgctgtgactggccaaggacagaaccccaatgccaccccg
gcccagtgggcctccagtcagtacggctatggcggcagtggaggtggcagcagtgcttac
catgtattcccaacccctgcccagcagcctgtggccacaccactgatgacgcccagctat
tcatatacgacccccagccagcccatcaccacaccccagtaccaccagctacaagccaac
accaccccacagtccacccaggcccaggcccagcctcagccctcctccagctcccggcac
cgacagcagccaaagtccaacagccatgctgccatagactgggggaagatggccgagcag
tggctgcaggagaaggaggcagagcgtcggaaacagaaacagcggctgacgcctcgcccc
tcgcccagcccaatgatcgaaagcacccccatgtccatcgctggcgatgccacgccactg
ttggatgagatggaccgctag
DBGET
integrated database retrieval system
