Trichosurus vulpecula (common brushtail): 118856181
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Entry
118856181 CDS
T10126
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03015
mRNA surveillance pathway
tvp05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118856181 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
118856181 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvp03019
]
118856181 (HBS1L)
Messenger RNA biogenesis [BR:
tvp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
118856181 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
DO-GTPase2
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
118856181
NCBI-ProteinID:
XP_036622208
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All DBs
Position
7:125267946..125401745
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AA seq
684 aa
AA seq
DB search
MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDKPPSFVEPVEEYDY
EDTKGPANSTSNHQLSGIDQARLYSCLDHMREVLGDDVPDQKMIEAVLQNKFDVEKALAM
VLEQDKKQNKSEEAISMGKATKGKSVDPQSSRSESEIVPKVTKMTVSGKKQSMGFEVPGV
TTEENGDSIHTPHKGPPSEDANVASSGILEPVSKSALPSHTIQALEEQSTTPTPVKKSNK
LKQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHLLYLLGNVNKRTMHKYEQESK
KAGKASFAYAWVLDETGEERERGVTMDVGMTKFETKTKVITLMDAPGHKDFIPNMITGAA
QADVAVLVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQE
IIGKLGHFLKQAGFKESDVAFIPTSGLSGENLITKSQSSELTKWYQGKCLLEQIDSFKPP
QRSIEKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGIMLHDEP
VDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPITKGFPV
LLHYQTVSEPATIRRLISVLHKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDFK
ELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggcacgacacaggaacgtccgaggctacaactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcaccatcaacagctgctcagttt
atttactcaagacgtgataagccaccgtcatttgttgagccagtagaagaatatgactat
gaagatacaaaaggacctgctaactctacttctaatcaccagcttagtgggattgatcaa
gctcgtctttattcatgccttgatcacatgagagaggtgcttggagatgatgtcccagat
caaaaaatgattgaagcagtgctgcaaaataaattcgatgtggagaaggctttagctatg
gtgcttgagcaagataaaaagcagaacaagagtgaggaagctatctccatgggaaaggcg
acaaaaggaaaatcagtagatcctcagtcatctcgaagtgaatctgaaattgtgccaaaa
gttaccaaaatgactgtgtctggaaagaagcagagtatgggatttgaagttcctggagtg
actactgaagaaaatggcgatagcatccacacacctcataaaggacctcctagtgaagat
gccaacgttgcttcttctggtattcttgagccagtttctaaatcagctcttccatcccac
accattcaggcattagaagaacagagcacaacaccaacgccagtgaaaaagtctaacaag
ctgaagcagcaaatagatgtgaaggctgaactggagaagaggcaagggggaaaacagctg
ctcaacttggtggtaattggtcatgtggatgctgggaaaagtactctgatgggtcatctg
ctttacctcctgggcaatgtaaataaaagaactatgcacaaatacgagcaagaatctaaa
aaggctggtaaagcctcgtttgcttatgcttgggtcttggatgagactggagaagaaagg
gaaaggggagttacaatggatgtgggtatgacaaagtttgagaccaagaccaaagttatt
acgttaatggatgctcccggccataaagacttcattccaaatatgataacaggagcagcc
caggctgatgttgctgttttagttgtggatgccagcaggggggaatttgaagctgggttt
gagactggaggacagacacgagaacatggactcttggttcgctctcttggagtaacacag
ctggcagttgcagttaataaaatggatcaggttaattggcaacaggaaagatttcaagag
attattggaaaacttggacacttcctcaagcaggctggatttaaggagagtgatgtggcc
ttcatccctacaagtggtcttagtggagaaaacctaattacaaaatctcaatcaagtgaa
ctaacaaaatggtatcaaggaaaatgtttgttagaacaaattgattctttcaaacctcca
cagagatctattgaaaaaccttttagattatgtgtctctgatgtttttaaagatcaagga
tctggattctgtgtgactggtaaaattgaagctggttatatccagactggtgaccgactg
ctcgcaatgcctcctaatgaaacttgcactgcaaaaggaatcatgctacatgatgaacct
gttgactgggcagcagcgggagatcacgttagtctcaccttggttggtatggatatcatc
aaaatcaacgttggttgtattttctgcggtcccaaagaacccataaaagcctgtactcgt
ttcagagctcgaatcctcatctttaatattgaaattcccatcactaaaggattccctgtg
ctgttacactatcaaactgtaagtgaacctgctaccatcagaagattgattagtgtccta
cacaaaagcactggcgaagtcacaaagaagaaacctaagttgttgactaaaggccagaat
gctttagtagaactacagacacaaagacctgtcgctcttgaattatacaaagactttaaa
gaactggggagattcatgctgcgttacagtggttctactatagctgcaggtgttgtcact
gagataaaagagtga
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