Trichosurus vulpecula (common brushtail): 118856465
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Entry
118856465 CDS
T10126
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04136
Autophagy - other
tvp04140
Autophagy - animal
tvp04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118856465 (ATG16L1)
04136 Autophagy - other
118856465 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
118856465 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118856465 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
tvp03029
]
118856465 (ATG16L1)
Membrane trafficking [BR:
tvp04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
118856465 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
118856465 (ATG16L1)
Mitochondrial biogenesis [BR:
tvp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
118856465 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
ATG16
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR3_2nd
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_Aladin
WD40_RFWD3
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
Ge1_WD40
Beta-prop_ACSF4
eIF2A
Beta-prop_WDR19_1st
Beta-prop_VPS8
INO80F
PUMA_CC
CCDC93_CC
HEF_HK
WHD_CYT4
Lipoprotein_6
Fez1
Motif
Other DBs
NCBI-GeneID:
118856465
NCBI-ProteinID:
XP_036622648
LinkDB
All DBs
Position
7:854903..887569
Genome browser
AA seq
634 aa
AA seq
DB search
MSTGLRGAGLPSWKRHIAEELRRRDRLQRQAFEEIIAQYNKLLEKSDLQSVLADKLQAEK
YDLQSRHEISPGHDGVWNDAQLQEMAQLRIKHQEELTELHKKRGELAQSVIDLNNQMQQK
DREMQMNEAKIAECLQKISELETECQELRNKLQDLERANQTLKDEYDALQITFTALEEKL
RKTTEDNQELVTRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPDDDI
EVLVDEASDAAEETSPIRAVSRTATKRLSQPAGGLLDSITNIFGLSESPLLGHHPSSDAA
RRRSVSSFPVPQDNPDAHPSSSKEVRVPTTAVYVFDAHDGEVNAVQFSPGSRLLATGGMD
RRVRLWEVFGDKCEAKGSLSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHT
LTGHSGKVLSAKFLLDNARIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVM
SGHFDKKIRFWDIRSESIVRELELLGKITALDLNPERTDLLSCSRDDLLKIIDLRVNAVK
QTFSAPGFKCGSDWTRVVFSPDGSYVAAGSAEGSLYIWSVLTGKVDKVLSKQHRSFYVTS
YESSRSLFSVFFLVTSSCTVIHRSLVGHSSSPRL
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacgggcctccggggtgccgggctcccgagctggaagcgccacatcgcggaggag
ctgcggcggcgggaccggctccagaggcaggccttcgaggagatcatcgcgcagtataat
aagttgctggagaaatcagatcttcagtcggtgttggctgacaaactacaagcggaaaaa
tatgacttgcaaagcaggcacgagatcagtccaggacatgatggcgtgtggaatgatgct
cagctacaagaaatggcccagctgaggattaaacatcaagaagaattaactgaattacat
aaaaaacgtggggagttagctcagtcggtgatcgatctaaataaccagatgcagcagaag
gaccgggagatgcagatgaatgaagcaaaaattgccgaatgtttgcagaaaatcagtgag
ctggaaactgagtgccaagaacttcgaaataagctgcaggacctcgaaagagccaaccaa
acactcaaggatgaatatgatgccctgcagatcacctttactgccttagaagagaaactg
aggaagaccactgaggacaaccaagagctggtcactcgctggatggctgagaaggcccag
gaggccaatcgtctcaatgcagaaaatgaaaaggattcccgacgccgccaggcccggctg
cagaaggagctcgcagaagctgccaaggaaccgttgcctgtagaaccggatgatgacata
gaagtgcttgtggacgaagcttcagatgcggccgaggagacgtcgcccattcgagcggtc
agccggacagccactaagcgactctcccagcctgctggaggccttctggactctatcact
aatatctttggtctgtccgagtctccccttttgggacaccacccttcttctgatgctgcc
aggaggcgttctgtctcctcctttcctgttcctcaggataacccagatgctcatcctagt
tctagtaaagaagtgcgggtgcccacaactgcagtttatgtcttcgatgctcatgatgga
gaagtgaacgccgtgcagttcagccctggctcaaggttactcgccacaggaggcatggat
cgaagagttagactttgggaagtgttcggagacaaatgtgaagcgaagggctccctttct
ggcagtaatgcaggaatcaccagcattgaatttgacagtgctggatcttacctcttggca
gcttcaaatgatttcgctagcaggatctggactgtggacgataaccgattacggcacacg
ctcacggggcacagtgggaaagtcctgtctgccaagttcctgctggacaatgcacggatc
gtttcaggaagtcatgaccggaccctcaaactctgggatctgcgcagcaaagtctgtata
aaaacggtatttgctgggtccagttgcaatgatattgtctgcacagaacagtgtgtaatg
agtggacattttgacaagaagatccgtttctgggacataagatctgaaagtatagtccgg
gaattggagctcttggggaagatcacggccctcgacttgaacccagagagaacagacctc
ttaagctgctcccgagatgatctcctcaaaattattgacctacgagttaatgctgtcaaa
cagaccttcagtgctccgggattcaagtgtggatctgattggacccgagttgtgttcagc
cctgacggcagctacgtagcagctggctcagcagaggggtctctctacatctggagtgtg
ctcacgggcaaggtggacaaggtcctttcgaagcagcacaggtcattctacgtcacttcc
tatgagtcttcccgcagtctcttctctgtattcttcttggtcacttcttcctgcacagtc
atacaccgtagtctggtgggccattcttcttcccccaggttatga
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