KEGG   Trichosurus vulpecula (common brushtail): 118856592
Entry
118856592         CDS       T10126                                 
Symbol
PER1
Name
(RefSeq) period circadian protein homolog 1
  KO
K21944  period circadian protein 1
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp04710  Circadian rhythm
tvp04713  Circadian entrainment
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    118856592 (PER1)
   04713 Circadian entrainment
    118856592 (PER1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tvp03400]
    118856592 (PER1)
DNA repair and recombination proteins [BR:tvp03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    118856592 (PER1)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS DUF4820
Other DBs
NCBI-GeneID: 118856592
NCBI-ProteinID: XP_036622869
LinkDB
Position
7:260244407..260267125
AA seq 1260 aa
MNGAVEGGSGVRGPGPGLGEGFDSGGSQSPGPPEHRPCPGPGLADDTDANSNGSSGNESN
GPESQGTSQHSSHSSSSGHGKDSALLETTESSKSTNSQSPSPPSSSIAYSLLSASSEQDN
PSTSGCSSEQSARARTQKELMTALRELKRRLPPERRGKGRSGTLATLQYALACVKQVQAN
QDYYQQWSLEEGQPCSMDMSSYTLEELEHITSEYTLRNQDTFSVAVSFLTGRIVYISDQA
AVLLRCKREVFRGARFSELLAPQDVGVFYGSTAPSRLPTWGSRTSAGSGPMDFTQEKSVF
CRIRGGPDREPSPRYQPFRLTPYVTKIQLSDGAPAQPCCLLIAERIHSGYEAPRIPPDKR
IFTTRHTPSCLFQDVDERAAPLLGYLPQDLLGAPVLLFLHPEDRPLMLAIHKKILQLSGQ
PFDHSPIRFCARNGEYVTMDTSWAGFVHPWSRKVAFVLGRHKVRTAPLNEDVFTPPAPVP
VPSRAMDPDIQELSEQIHRLLLQPVHSASPTGMCGLGPPTSPGPFLSPGSSSDSNGGDTD
HPGPPAPVTFQQICKDVHLVKHQGQQLFIDSRSQPNWPPCSAPDTFKTRDLSGRPLEAGP
AGLNQVRPLAVSTAPEDSETKGPSSCSYQQINCLDSIIRYLESCNVPNTVKRKCAFSSHT
ASSTSDDDRQKAGQGSGVPKKDPPEELSQEGPPLQKEPVVGGPLTPLTLANKAESVVSIT
SQCSFSSTIVHVGDKKPPESDIVMMEELPGLTCGPAPSPTMATPDPTPDAYRPVGLTKAV
LSLHTQKEEQAFLTRFRDLSRLRVFDTPSKGPSPPVDRGYCHGPNPGRRHHGKSKAKRSR
HQQLPLTEAPGYTSHPSPTPLTTPWPSQPNPPTSAAFPTVVQTYPLPIFSTRGCPQPSAP
TPSPSPFSSPLVTPMVALVLPNYLFSSPPTSYPCGVPQTLSDGPLTPAPCSPSPTLPAMP
PSPPQCPDSPLFNSRCSSPLQLNLLQLEETTRGEGVATVGEPGSNPRPPAPGEEAPQPEA
GLVEMNESSNQDALSGSSDLLELLLQEDSRSGTGSAESGSLASGSGSHGGSTSASITRSS
QSSHTSKYFGSIDSSEAEPTGTQVGVDPGAGPGEQVIKYVLQDPIWLLMANADHRVMMTY
QVPSRDMASVLQQDRERLRAMQKQQPRFSEEQRRELGAVHTWVRKGQLPQALDVMACVDC
GSSIPDPQYPDDTLFPELDGLGLEPMEEDGGGASPDTAMDEEEQGGELATSELPAPKTTS
NT seq 3783 nt   +upstreamnt  +downstreamnt
atgaatggcgctgttgagggaggcagcggggtaaggggaccaggccctgggctaggtgaa
gggtttgattcagggggatcccaatcccctgggccccccgaacacagaccctgccctggt
cccggcctcgcggatgatacggatgcaaacagcaatggttcaagtggcaatgaatccaat
ggaccggagtcccagggcacttcccagcacagttctcacagctcttcttctggccatggg
aaggactctgccctgctggagacgacagaaagcagcaagagcaccaactctcagagccca
tcccctccaagcagttccatcgcctacagcctcctgagtgccagctctgagcaggataac
ccgtcaaccagtggctgcagcagtgagcagtcagcccgagcacgaacacagaaggagctg
atgacggccctccgagagctgaaacgtagacttccgccagaacgccgagggaagggtcga
tcagggactttggccacgctgcaatatgcacttgcctgtgttaaacaagtccaggccaat
caagattactaccagcagtggagcttagaagaggggcagccttgttccatggacatgtcc
agctacaccttagaagagttagaacacatcacatctgagtatactcttcgaaatcaggac
actttctccgtggctgtctcttttctcactggacggattgtctacatttcggatcaagca
gctgttcttctacgctgtaagagagaagtcttccggggtgcccggttctcagagctgttg
gcccctcaggatgtgggtgtcttctatggctccactgccccctctcgcctgcccacgtgg
ggttcccggacctctgccggttcaggtcccatggatttcacacaagagaaatcagtcttc
tgcaggatcagaggtggcccagaccgagaaccaagtccccgataccagccatttcgactg
accccctatgtgactaagatccagctctcagatggagccccagcacagccatgctgtctg
ctgattgctgaacgcattcactctggctatgaagctcccaggattcccccagacaagagg
atcttcacaacacggcacacacctagctgtctgttccaagatgtagatgaaagggccgcc
ccattgctgggatacttgcctcaggatctgctgggggcaccagtgctccttttcttacac
cctgaagaccgacctctcatgttggcaatccacaagaagattttgcagctgtcaggccaa
ccttttgaccactcccccatccgcttctgtgcccgaaatggggaatatgtcaccatggac
accagttgggctggctttgtccatccctggagccgaaaagtggcctttgttttgggtaga
cacaaagttcgaacggctccgctaaatgaggatgtattcactcccccagcccctgtccca
gtaccctcgagagctatggacccagacatacaggagctctcagaacagatccaccgatta
ctgctgcagccagtccatagtgcgagtcccacagggatgtgtggattaggccctccaact
tctccaggtccctttctaagccctggctcatccagcgatagcaatggtggagacactgat
catcctgggcctcctgctccagtgacattccagcagatctgtaaagatgtgcatcttgtg
aagcaccaaggtcagcagcttttcattgattctcggtcccaacccaactggccgccatgc
tcagccccagatactttcaagaccagggacctctcaggcagacccttggaagcaggccct
gctgggttgaaccaagttcggcctcttgcggttagtactgcccctgaggattcagagaca
aaagggccatccagttgttcctaccagcagatcaattgcctggacagcattatccgctac
ctggagagctgtaatgtccccaacacagtgaagaggaaatgtgccttctcttcccacacg
gcatcctccacgtctgatgatgaccgacagaaggcaggccagggctctggagtgcccaag
aaagatccaccagaagagctgtctcaggaggggccccccctccagaaggagccagtggtg
ggaggtccactgaccccgctcacccttgccaataaggcggagagtgtggtatccatcacc
agtcagtgtagcttcagctctactatcgtccatgtaggagacaagaagcccccggagtcg
gatattgtcatgatggaggaattgcctggcctgacctgtggtccagctcccagtccaaca
atggccactcctgaccccactcctgatgcctatcgccctgtgggattgaccaaagctgta
ctgtcacttcatacacagaaggaggagcaggccttcctcacccgatttcgggatctcagc
agactccgtgtctttgataccccttccaagggaccttcaccccctgttgatcgaggctac
tgccatggtcctaatcctggccgtcgccaccatggcaaatcaaaagccaaacgttcaagg
caccaacagcttcctctgactgaggctcctggctatacctctcatccttccccaacacct
ctgaccactccgtggccctctcaacccaacccacccacatctgccgctttcccaactgtg
gtgcaaacctaccccctccccattttttcaaccagaggttgcccccaaccttcagctcct
accccttctccttcacccttttcttcccccttggtaacccctatggtggccttggtcctg
cccaactatttgttctcatctccccccaccagttacccctgtggggttcctcagactcta
tcagatgggcctctcacccctgcaccctgttcaccttccccaactttacctgctatgcca
cctagccctccccaatgccctgattcacccctgttcaactcccggtgcagttccccactc
cagctgaacctgctgcaacttgaggagactacccggggggaaggggtagcaacagttggg
gagcctgggagtaatcccaggccacccgctccaggagaggaggctccacagccagaagct
ggactggtggagatgaatgaatcctctaatcaggatgcactgtcgggctccagtgatctg
ttggagctgttgctccaggaggactcaagatctggcactggctcagccgaatcaggctcc
ctggcttctggctctggctcccatggtgggagcacctcagccagcatcactcgcagcagc
cagagcagccacaccagcaagtattttgggagtattgactcctctgaggctgagccaaca
gggacccaggttggggtagacccaggggcaggacctggggaacaggtcattaagtatgtt
ctgcaggatcccatctggctactcatggctaatgctgaccatagggtcatgatgacctat
caagtgccctcaagggatatggcttcagtgctgcaacaggaccgagaaaggctccgtgcc
atgcaaaaacaacagcctcggttttcagaagagcaacgtagggagctgggtgctgtgcat
acctgggtgcggaagggccagctgccccaggccctggatgtgatggcttgtgtagattgt
ggcagcagcatcccagatccacagtatccagatgacacactcttccctgagctggatgga
ctggggctagagccaatggaggaagatgggggtggggcctccccagacacagccatggat
gaagaggaacaaggtggggagctagctacttctgaattacctgctccaaaaaccaccagc
taa

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