Trichosurus vulpecula (common brushtail): 118856716
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Entry
118856716 CDS
T10126
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118856716 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tvp03041
]
118856716 (PRPF38B)
Spliceosome [BR:
tvp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
118856716 (PRPF38B)
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
118856716
NCBI-ProteinID:
XP_036623051
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All DBs
Position
7:complement(62218032..62230537)
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AA seq
545 aa
AA seq
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MANNSPALTGSNSQPPPQHQAAAAAAQQQQQCGGGGGGAIKPAASGKQGNVLPLWGNEKT
MNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGG
VRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLW
DWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKT
RPRKIKKDGKEGIEEIDRHTERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDREL
EREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDRE
KENERGRRRDRDYDKERGNEREKERERSRERRSRSEVEEKKHKEDKDEKKHRDDKKDSKK
EKKHSRSRSRERKHRSRSRSRNTGKRSRSRSKEKASKHKNESKEKSNKRSRSGSRGRTGS
VEKSRKREHSPSKEKSRKRSRSKERSHKREHSDSKDQSDKQDRRRSQSTERESQEKQHKN
KDETV
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacaacagcccggcgctgacaggcagcaactcgcagccgccgccgcagcaccag
gcggccgcggccgcggcccagcagcagcagcagtgcggcggcggcggtggcggcgccatt
aagcccgcagcctcgggcaagcaggggaacgtgctgccgctgtggggcaacgagaagacc
atgaacctcaaccccatgatcctgaccaacatcctgtcgtcgccctacttcaaggtgcag
ctctacgagctcaagacctaccacgaggtggtggacgagatctacttcaaggtcacacat
gttgagccgtgggaaaaaggaagcagaaaaacagcaggccagacagggatgtgcggaggg
gttcgaggtgttggaacaggaggaattgtttctacagctttttgcctgttatacaagtta
tttactttgaaactcactcgcaagcaagtgatgggtctcataacacatacagattctcca
tatattagggcccttggatttatgtatataaggtacacacagcccccaacagatctctgg
gactggtttgaatccttccttgatgatgaagaggacctggatgtgaaagctggcggaggc
tgtgtaatgaccattggggaaatgcttcgttcttttctcaccaaattagagtggttttct
accttatttccaagaattcctgttccagttcagaaaaatattgatcaacaaattaaaaca
agacctagaaaaatcaagaaggacgggaaggaaggaattgaagaaatagaccgccatact
gaacgaagacgttcaaggtcaccaagaaggtcattgagcccaagaagatccccaagaaga
tccagaagtagaagccatcatcgagaaggtcatggttcttctagttttgacagagaatta
gaaagagagaaggaacggcagcgactagaacgtgaggccaaggagagggaaaaagaaagg
cgaagatcccgaagcattgatcgtgggctagaacgcaggcggagcaggagtagggaaagg
cacagaagtcggagtcggagtcgtgacagaaagggagataggagggacagagatcgtgaa
aaagagaatgagagaggccggagaagagaccgtgattatgacaaagaaagaggcaatgaa
agagaaaaagagagggaaaggtcaagagagcggagaagtaggagtgaggtagaagagaag
aaacataaggaggacaaagatgaaaagaagcacagggatgacaaaaaagattccaaaaaa
gagaaaaaacatagtagaagtagaagcagggaaaggaagcatcgaagtagaagccgaagt
agaaatacaggaaagcgcagtcgaagccggagcaaagaaaaggcaagtaaacataaaaat
gagagtaaagaaaaatcaaataaacgaagcagaagtggcagtcgaggaagaactggcagt
gttgaaaagtccagaaaacgggaacacagtcccagcaaggaaaaatcccgaaaacgtagc
agaagcaaagagcgttctcacaaacgagagcacagtgatagcaaggaccagtctgacaaa
caggatcgccggaggagccagagtacagagcgcgagagccaagaaaagcagcataaaaac
aaagatgagactgtgtga
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