Trichosurus vulpecula (common brushtail): 118856864
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Entry
118856864 CDS
T10126
Symbol
VPS8
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118856864 (VPS8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118856864 (VPS8)
Membrane trafficking [BR:
tvp04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
118856864 (VPS8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
zf_RING_Vps8
VPS8_N
TPR_Vps41
zf-RING_Vps41
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
Clathrin
zf_RING_Vps8_fungal
WD40_CDC20-Fz
zf-RING_2
zf-RING_11
zf-RING_UBOX
Beta-prop_WDR5
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
118856864
NCBI-ProteinID:
XP_036623284
LinkDB
All DBs
Position
7:15495330..15675167
Genome browser
AA seq
1427 aa
AA seq
DB search
MASEVDPESEGVVPSPRGGLGEGLAQALEASLPRLSCIDLDKDLEFRNELIDDKEFDIPQ
VDTPPTLESILNETDDEDESFVLEDPTLLNIDTFDTHSYDTSSVASSDSGDRTNLKRKKK
LLDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAIAVSSLIAVGTSHGLALIFGKD
QNQALRLCLGSTSVGEQYGAISALSINHDCSRLLCGFAKGQMTMWDLASGKLLRSITDAH
PPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMGVRTCESRCLFSGSKGEVCCIEPL
HSKAELKDHPITQFSLLAMASLTKILVIGLKPSLKVWMTFPYGRMDPSSVPLLAWHFVAA
NNYVNPTLAFCRGDVVHFLLVKRDESGAIHVTKQKHLHLYYDLINFTWINSRTIVLLDSV
EKLHVIDRLTQEELETVEISEVQLVYNSSHFKSLATGGNVSQALALVGEKACYQSISSYG
GQIFYLGTKSVYVMTLRSWRERVDHLLKQECLTEALALAWSFHEGKAKAVVGLSGDASKR
KAVVADRMVEILFHCADRALKKCPDQGKIQVMEQHFQDTVPVVVDYCLRLQRRDLLFSQM
YDKFSENSVAKGVFLECLEPYILSDQLLGITAQVMKDLLIHFQDKKLMENVEALIVHMDI
TSLDIQQVVLMCWENRLYDAMIYVYNRGMNEFISPMEKLFKVIAPPLSAGKSLTDEQVIM
GNKLLVYISCCLAGRAYPLGDIPEDLVPLVKNQVFEFLIRLHSAEASSEEEIYPYICTLL
HFDTREFLNVLALTFEDFKNDKQALEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQ
LAKPDNTLFVNRTLFDQVLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAE
RAEFYQICEFMYERGHQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSLEEKQSVWQKA
MLHIEELVSLNPCKAAELVATHFSGQVEAVIHKLQSPFLLFQFLRSLLDPREGISMSQES
LQVAPGITEQFIELLCQYNPHQVIETLQVLETYRLEETIEITQKYQLLEVCAYLLEKKGD
VHGAFLIMLERLQSRLQEFTKESENSLEAPSLKDVEEILVETIALCQRNSQSLNQQQREA
LWFPLLEAMMAPQKLSGSSTPPRHAEPLKSLTMQVLNSMAAFIALPSILQRILQDPVYGR
GKLGEIQGLILGMLDTFNYEQTLLETTTSLLNHDLHWSLCNLRASVTRGLNPKQDYCCVC
LQQYRRRQEVADDIIVFSCGHLYHSLCLLNKECAVGVGGQARWTCYRCNSSNKIGKLSES
ASSVKKGQLTQAQVKMSPSCSSPRGDSAAKKTQSEPGLDPQQIQAFDQLCRLYRGTSRLA
LLTELSQNQSSDSHRLLGVSKSGPTLNSIFQNENFQLHLTPPPLTED
NT seq
4284 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagtcgatcctgagagtgaaggggtggtcccttcaccccgaggagggctt
ggggaaggcctggcccaggccctggaggcttcactccccagactctcctgcatagatctg
gacaaggacctggagttcaggaatgagctgatcgatgacaaggagtttgatattcctcag
gtggacacccctcccaccctagaaagcatactcaatgagactgatgatgaagatgagtcc
tttgttcttgaggatcccactctgctaaatattgacacttttgacacgcactcctatgac
acgtcgtcagtggcaagctcagacagtggcgatcgaaccaatctgaaaaggaagaagaag
cttcttgactctttttcactccatggctcagtcatgcggcattcactattgaaggggatc
tcggcccagattgtctcggcagctgataaagtcgatgctggcttacccactgcaatcgcc
gtgtccagtctgatcgcagtggggacttctcatggattggccttaatcttcggaaaagat
cagaatcaagccctccgcctctgcctgggcagcaccagcgtcggggaacagtacggggcc
atctccgctctcagcatcaaccacgactgctccagacttctctgcggctttgccaagggc
cagatgaccatgtgggacttggccagcgggaagctcttgagatcaataacagatgcccac
cccccaggaacagcaattctgcacattaagtttacagatgacccgactctcgccatttgc
aatgacagcggcggttctgtgtttgagctgacatttaagcgagtgatgggagtgagaacc
tgcgaatcccggtgtctgttcagtgggtccaagggggaagtttgctgtattgagcctctt
cattccaaggccgagctgaaagatcaccccatcacccagttttccttactggccatggca
tccttaactaaaatattggtcattggactgaagccatctctgaaagtgtggatgactttt
ccctatggacggatggatccctccagcgtcccgctgctggcctggcattttgtggcagcc
aataattatgtgaaccccacgctggccttttgcagaggagacgtcgtccactttctgttg
gtgaaaagagatgaatcaggcgccatccacgtcactaaacaaaagcacctgcacctgtac
tatgacctcatcaacttcacctggatcaattcccggacgatcgtgctcctggacagtgtg
gagaagctgcatgtgatcgatcggctgacgcaggaggagcttgagacggtagagatttcc
gaggtgcagctggtctacaacagcagccacttcaagtccctggccacgggaggcaacgtc
agccaggccctggctctggttggagagaaagcctgttatcagtccatcagtagttatggc
ggtcagatcttttatttaggaacaaaatctgtttatgtgatgacgttgaggagctggaga
gagagagtagatcatctcctgaaacaagagtgtctgacagaggccctggctctcgcgtgg
tctttccatgaagggaaggccaaagctgtcgttggcttgtcgggggatgcaagtaaacgg
aaggctgttgttgccgatcggatggttgaaatcctcttccactgtgcagaccgagctctg
aaaaaatgcccagaccagggcaaaatccaggtgatggagcagcattttcaggacacggtg
ccggttgttgttgattactgccttcggctgcagcgcagggatcttttatttagccagatg
tatgacaagttcagtgagaattctgtggccaagggggtcttcttggagtgcctggagcct
tacattttaagtgaccagctgctgggaatcacagcccaggtgatgaaagatttgctcatt
cactttcaagataaaaagttgatggagaatgtggaggccctgatcgtacatatggacatc
accagcctggacatacaacaggttgttctcatgtgctgggagaatcgcctttacgatgcc
atgatctacgtgtacaacaggggtatgaatgaattcattagtccaatggagaaacttttc
aaggtcattgctcctcctctgagtgcagggaagtctctcacagatgaacaggttattatg
ggcaacaagcttcttgtctacataagctgctgcttggcaggtcgtgcttatcccctgggt
gacatccccgaagacctggtgcccttggttaaaaaccaggtctttgagtttctgatccgt
ctgcattctgctgaggcctcctctgaggaagagatctatccttacatctgcaccttgctt
cacttcgataccagagagttcctgaacgtcctcgccctgacttttgaagactttaaaaat
gacaagcaagctctggaataccagcagcggatcgtggacatcttgctgaaggtcatggtg
gaaaattcagattttactccttcccaagttgggtgtctcttcaccttccttgcccgacag
ctggccaagcctgacaatacactttttgtgaacaggacgctttttgaccaggtccttgaa
ttcctctgcagccccgatgacgactcccggcactcggagaggcagcaggtcctccttgaa
ttgctccaggctggagggatcgtgcagtttgaggagagccggctcatccggatggccgag
agagccgagttctaccaaatttgtgaatttatgtatgaacgaggacaccagtacgacaag
attattgactgctacctccgggacccgctgagagaggaagaggtctttaactacattcat
aacatcttgtccattcctgggcacagcctggaggagaagcagtccgtgtggcagaaggcc
atgctgcacatcgaggagctcgtgtctctgaacccctgcaaggcagcagagttggtggcc
acccacttctctgggcaagtggaggccgtcattcacaaactccagagtccatttttgctt
ttccagtttctgaggagccttcttgacccaagggaaggaatttccatgagccaagagtcc
ctacaggtggcccctggcatcacagagcagttcattgagttgttgtgtcaatataaccct
caccaagtgattgagactctgcaagtccttgagacctaccggctggaagagaccattgag
attacccagaagtaccagctgcttgaagtatgtgcctacctcttagagaagaaaggagat
gttcatggtgctttcttaataatgcttgagagactacaaagcaggctccaggagtttaca
aaggaaagtgaaaactccctcgaggccccctcattgaaggatgtggaagagatcttggtg
gagacaattgccctctgccaaaggaattcacagagtttgaaccagcaacagcgagaggct
ctctggtttccactgctggaggcaatgatggcccctcagaagttgtccggctcatccact
ccgcctcgacatgcagaacctctgaagtctctgaccatgcaggtattgaacagcatggcg
gccttcatcgctctgccatccatcctgcagcgaatcctccaagatccagtttatggaaga
ggaaaacttggcgagatccaaggactcatcctgggaatgctggacaccttcaactatgaa
caaacactcctggaaacaaccaccagcctcctaaaccacgacctccactggtcactctgt
aacctgagggcatcggtcactcgagggttaaacccgaaacaggattactgctgtgtctgc
ctgcaacagtacagacggcgccaggaggtggccgatgacatcatcgtcttcagctgtggc
cacctctaccactccttgtgcctgctcaacaaagagtgtgccgtgggcgtgggcggccag
gcccggtggacctgctacaggtgcaattccagcaacaagatcgggaagctcagtgaaagt
gcatccagtgtgaagaaaggacagctcacccaagcccaggtgaaaatgtctccttcctgt
tcttcaccccgaggagattctgctgctaagaagacccagtcagaaccaggactggatcct
cagcagatccaggctttcgaccagctctgccgcctttaccggggaacctccaggctggcg
ctcctgaccgagctctctcagaaccaaagtagtgacagtcaccggctcctgggggtctcc
aagagcggccccaccctcaacagcatcttccagaatgagaacttccagctgcacctgacc
cctcctcccctgactgaggactga
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