KEGG   Trichosurus vulpecula (common brushtail): 118857024
Entry
118857024         CDS       T10126                                 
Symbol
SF3B4
Name
(RefSeq) splicing factor 3B subunit 4
  KO
K12831  splicing factor 3B subunit 4
Organism
tvp  Trichosurus vulpecula (common brushtail)
Pathway
tvp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tvp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118857024 (SF3B4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tvp03041]
    118857024 (SF3B4)
Spliceosome [BR:tvp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    118857024 (SF3B4)
 Complex B
    118857024 (SF3B4)
 Complex C
   U2 SnRNP specific factors
    118857024 (SF3B4)
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB
Other DBs
NCBI-GeneID: 118857024
NCBI-ProteinID: XP_036623509
LinkDB
Position
7:46476878..46479829
AA seq 424 aa
MAAGPISERNQDATVYVGGLDEKVSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVE
FLSEEDADYAIKIMNMIKLYGKPIRVNKASAHNKNLDVGANIFIGNLDPEIDEKLLYDTF
SAFGVILQTPKIMRDPDTGNSKGYAFINFASFDASDAAIEAMNGQYLCNRPITVSYAFKK
DSKGERHGSAAERLLAAQNPLSQADRPHQLFADAPPPPSAPNPVVSSLGSGLPPPGMPPP
GSFPPPVPPPGALPPGIPPAMPPPPMPPGAGAHGPPSAGTPGAGHPGHGHSHPHPFPPGG
MPHPGMSQMQLAHHGPHGLGHPHAGPPGSGGQPPPRPPPGMPHPGPPPMGMPPRGPPFGS
PMGHPGPMPPHGMRGPPPLMPPHGYSGPPRPPPYGYQRGPLPPPRPSPRPPVPPRGPLRG
PLPQ
NT seq 1275 nt   +upstreamnt  +downstreamnt
atggcggccgggcccatctccgaacggaatcaggatgccactgtgtacgtggggggcctg
gacgaaaaggtcagtgaaccgctgctgtgggagctctttctgcaggccgggcccgtggtc
aacactcacatgcccaaggacagagtcacagggcagcaccaaggctatggatttgtggaa
ttcctgagcgaggaggatgcggactatgccattaagatcatgaacatgattaaactctac
gggaagccgatccgagtaaacaaagcctcagcgcacaacaagaacctggacgtcggggcc
aacattttcatagggaacctggaccccgagatcgatgagaagctgctctatgacaccttc
agcgcctttggggttattttgcagacccccaagatcatgcgggaccctgacacaggcaac
tccaagggctatgcctttattaattttgcttcgtttgatgcctctgatgcagcaatcgag
gccatgaacgggcagtatctgtgtaatcgacccatcacggtatcttatgccttcaagaag
gactctaagggtgaacgccatggctctgcagctgagcgacttctggctgcccagaacccc
ttgtctcaggcagatcggccacatcagctatttgctgacgcaccacccccaccctctgcc
cctaaccctgttgtgtcttccttgggatctgggcttcccccaccaggtatgcccccacca
ggttcattcccacctccggtgccacctcctggagcccttcctccaggaatacccccggcc
atgcctcccccacctatgcctccaggggctggagctcatggccctccatcagcaggaacc
cctggggcaggacatcctggacatggacactcacatccgcatccattcccaccaggtgga
atgcctcatccgggtatgtctcagatgcagctcgcccaccatggtccccatggcttggga
cacccccatgcagggcccccaggctcagggggacagcctcctccacgaccaccaccagga
atgcctcatcctggcccccctcctatgggaatgccaccgcgaggacccccttttggatct
cccatgggtcacccaggccccatgcctccccatggtatgcgaggacctcctcctttaatg
cccccccacggatacagcggtccccctcgacctccaccttatggctaccaaagaggaccc
cttcccccaccccgaccctcccctcgtccaccagtaccccctcgtggtccacttcggggt
cctcttcctcagtag

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