Trichosurus vulpecula (common brushtail): 118857215
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Entry
118857215 CDS
T10126
Symbol
RORC
Name
(RefSeq) nuclear receptor ROR-gamma
KO
K08534
RAR-related orphan receptor gamma
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04659
Th17 cell differentiation
tvp04710
Circadian rhythm
tvp05321
Inflammatory bowel disease
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09150 Organismal Systems
09151 Immune system
04659 Th17 cell differentiation
118857215 (RORC)
09159 Environmental adaptation
04710 Circadian rhythm
118857215 (RORC)
09160 Human Diseases
09163 Immune disease
05321 Inflammatory bowel disease
118857215 (RORC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
tvp03000
]
118857215 (RORC)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
tvp03310
]
118857215 (RORC)
Transcription factors [BR:
tvp03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118857215 (RORC)
Nuclear receptors [BR:
tvp03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
118857215 (RORC)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
SipA
DUF7222
Motif
Other DBs
NCBI-GeneID:
118857215
NCBI-ProteinID:
XP_036623775
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Position
7:44484792..44515909
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AA seq
512 aa
AA seq
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MDRAPPSHHKATRGSETAKKTHTSQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQ
CNVAYSCTRQQSCPIDRTSRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLHAEVQK
QLQQQRQQVATPPPAGTRGADTPAYPIALPSGQLPLGSSPDLPEASACPPALLSTPGPGP
SYPNSLAKMGLAGAVYSRGYSPDRAKAEVGRAFYGLGSQLSPDRCELHIGEPRHLVLGEP
SQGRDLYSSPSFRLELPNASLTEIEHLIQNVCKSYQETCQLRLEDLQRQRSNVFSREEVT
NYQRKSMWEMWERCAHRLTEAIQYVVEFAKRLAGFMELCQNDQIVLLKAGAMEVVLVRMC
RAYNADNRTVFFEGKYGGVDLFRALGCSELIGSIFDFSHSLCALHFSEDEIALYTALVLI
NANRPWLQEKRKVEQLQHNLELAFHHLLCKTHRQGILAKLPPKGKLRSLCSQHMEKLQSF
QHLHPVVVQAAFPPLYKELFSTETEPPGVLSD
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggacagggccccaccgagtcaccacaaagccacaagggggtctgaaactgccaagaag
acccatacctctcagattgaagtgatcccttgtaagatctgtggggacaaatcttctggg
atccactatggggtcatcacctgtgaagggtgcaagggtttctttcgccggagccagcaa
tgtaatgtagcatactcctgtacccgacagcaaagctgccctatagaccgtaccagccgg
aaccgctgtcaacactgtcgcctgcagaaatgcctggcattgggcatgtcccgggatgct
gtcaagtttggccgaatgtccaagaagcagagggacagtttgcatgccgaggtgcagaag
caactacagcagcagcgacaacaagtggccactccgccccctgcggggaccagaggggca
gatacccctgcctatcccattgccctccccagtggacagctacctctgggctcctcacct
gacctgcctgaggcctctgcctgcccccctgctctccttagtaccccaggccctggaccc
tcctaccctaatagcctggccaaaatggggctggctggggctgtgtactcccgtgggtac
agcccagatcgggcaaaggctgaggtcggcagagctttctatggcttgggtagccagctg
tcccctgacaggtgtgagctccacattggggaaccccgacatctggtgcttggggagcca
agccaagggagggacttgtacagcagccccagcttccgcctcgaactccccaacgcctcc
ctgactgagattgagcacttgatccaaaacgtttgtaagtcctatcaagagacttgtcag
cttcgactggaagacctgcagaggcaacgttccaacgtcttctcccgggaggaggtgacc
aactaccaaagaaagtcaatgtgggagatgtgggaacgctgcgcccatcggctcaccgag
gccatccagtacgtggtggaattcgccaaaaggctagcgggcttcatggagctgtgtcag
aatgaccagattgtgctgctcaaagcaggggccatggaggtggtactggtgaggatgtgc
cgagcctacaatgctgacaatcgcacagtcttctttgagggcaaatatggaggcgtggac
ctgttcagagccttgggctgcagtgaactcattggttccatctttgacttctcccactcc
ctgtgtgctctgcatttttccgaggacgagatcgctctctacacagcccttgttctcatc
aatgccaacaggccgtggttacaagagaaaagaaaggtggagcagttgcagcacaatttg
gagctggcatttcatcatcttctgtgcaagactcaccgccaaggcatcctggctaagctg
ccacccaaggggaagcttcggagcttatgtagtcagcacatggagaagctgcaatccttc
cagcatcttcatcctgttgttgtccaagctgccttccctcccctctacaaggaactcttc
agtacagaaactgagccccctggagtgctatctgactga
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