Trichosurus vulpecula (common brushtail): 118857355
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Entry
118857355 CDS
T10126
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain
KO
K08131
collagen type IX alpha
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04151
PI3K-Akt signaling pathway
tvp04510
Focal adhesion
tvp04512
ECM-receptor interaction
tvp04518
Integrin signaling
tvp04820
Cytoskeleton in muscle cells
tvp04974
Protein digestion and absorption
tvp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
118857355 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118857355 (COL9A1)
04518 Integrin signaling
118857355 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118857355 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
118857355 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
118857355 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
118857355 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tvp00535
]
118857355 (COL9A1)
Proteoglycans [BR:
tvp00535
]
Extracellular matrix (ECM) proteoglycans
Others
118857355 (COL9A1)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
Laminin_G_3
Laminin_G_1
Toxin_R_bind_N
Motif
Other DBs
NCBI-GeneID:
118857355
NCBI-ProteinID:
XP_036623935
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Position
7:208004167..208126761
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AA seq
919 aa
AA seq
DB search
MESSWKISFFFFICCFLGPWASATVQRYRRFPISLTPNPENDLCPPVRIGQDDLPGFDLI
SQFQVDKAASRGAIQKVTGSTSLQVAYKLGNNVDFRIPTRHLYPNGLPEEYSFLTTFRMT
GSTLKKNWSIWQIQDSLGKEQVGMKINGQTQSLAFSYKGVDGSLQTAAFSNAPTLFDSQW
HKVMIGVERRSVTLFIDCKRIESLPIKPRGKIDVDGFAVLGKLTDNPQVSVPFELQWLLI
HCDPLRPRRETCHELPVRPSQETLERGPPGPQGPPGPPGPPGVPGIDGIDGDRGPKGPPG
PPGPNGDPGKPGAPGLPGTPGADGLTGPDGSPGPVGPRGQKGEPGVPGSRGFPGRGIPGP
PGPPGASGLPGELGRVGPSGDPGRRGPPGPPGPPGPSGTIGLHDGDPLCPNSCPPGRSGY
PGLPGLRGHKGAKGEIGEPGRQGHKGEEGDQGELGEVGAQGPPGPQGLRGITGIVGAKGD
KGARGLDGEPGPQGLPGAPGDQGQRGPLGETGPKGDRGVQGPRGINGLPGPKGENGLPGV
DGRDGIPGMPGSKGEPGKPGPPGDIGRQGLPGLPGTPGAKGVAGEKGNTGAPGVPGAMGN
SGKPGQEGPQGEVGPRGPRGLPGSRGELGPSGPPGPPGKLGPFGSPGLPGLPGPPGLPGL
KGDRGSVGEPGPKGEQGRAGEEGEAGGKGELGDIGLPGPKGSVGNPGEPGLRGPEGSRGL
PGEEGSRGPPGPRGMQGERGPTGLPGIQGPAGRAPTDQHIKQVCLRVMQENLALMAASLR
RPDSGASGLPGRPGPPGPPGPPGENGFPGQMGPRGLPGLKGPPGELGLRGPKGDLGERGE
RGPPGRGPKGLPGSIGLPGDPGPASYGKEGRDGERGPPGPAGIPGVPGPPGPAGPPGFCE
PASCAVQAGQRAFSKGPDQ
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atggagagcagctggaaaatttcatttttcttcttcatatgctgtttcctgggaccttgg
gcatctgcaactgtccagcgttacagaagattccccatctccttgactcctaatcctgag
aatgacctttgtccgccagtcaggattggccaggatgatttaccaggatttgacttaatt
tctcagttccaggtagataaagcagcatctagaggagctatccagaaggttacaggctca
acatcattacaagtggcttataaattgggaaataatgtagacttcaggatcccaaccaga
catctgtatcccaatggactacctgaagaatactcctttttaacaacttttcggatgact
ggaagcactctgaaaaagaactggagcatctggcagatacaggattccttggggaaagag
caagttggcatgaaaattaatggccaaactcaatcccttgcattttcctataaaggtgtg
gatggcagcctccaaaccgcagctttttcaaatgctcctactttgttcgattcccagtgg
cataaagttatgattggtgtggaaaggagaagcgtcactctctttattgactgcaaaagg
attgaatccttacccataaagccaaggggcaagattgatgttgatggttttgctgttcta
ggaaagctcacagataatcctcaggtttctgttccgttcgagctccagtggttgctgatt
cattgtgaccctctgagacccagaagagaaacttgccatgaacttccagtccggccctca
caggaaaccctagagagaggtcccccgggtcctcaagggcctcctggtcctcccggtccc
ccaggagttccaggcatcgatggtattgacggtgatcgaggtccaaagggtcccccaggt
cccccgggtcccaacggagacccaggaaaaccaggagctccgggcttaccaggcacacca
ggcgcagatggcttgacaggacctgatggatcacctggtccagttggtccaagaggacaa
aaaggagaacctggggtcccaggatcacgtggatttccaggtcgtggtattcctggacca
cctggacctcctggtgcatcaggacttcctggagagcttggtcgtgtggggccatctggt
gatcccgggagaagaggaccacctggccctccaggtcccccaggacctagtggaacaatt
gggcttcatgatggagatccactgtgtcccaattcctgtccaccaggtcgttcaggatat
ccaggtctaccaggcttgaggggtcacaaaggggcaaagggagaaattggggaaccagga
agacaaggtcacaagggagaagaaggtgaccagggagaactcggagaagtgggagcacaa
ggacctccgggtcctcaaggcttgagaggaataactggtatagttggggccaaaggagac
aaaggagctcgtggccttgatggtgagcctggccctcagggtcttcctggtgcacctggt
gatcaaggacagagaggaccactaggagaaacaggccccaagggtgacagaggtgttcag
ggtcctagagggataaatggcctcccaggtcccaaaggagagaatggcttgccaggggta
gatggtcgagatggaatccctggaatgcctggatcaaagggtgaacctgggaaacctggt
cctcctggtgatataggaaggcaggggcttcctggtttacctggaactcctggtgcaaaa
ggtgttgctggtgaaaagggtaatacaggtgctcctggggtacctggtgctatgggaaat
tcaggcaaaccgggtcaagagggacctcaaggggaagttggaccacgaggaccccggggg
ctaccaggtagcagaggagaattaggacccagtggtcctccaggccccccaggtaaactg
ggtccttttggcagtccaggccttcctggtctgcccggtccccctggactccctggattg
aaaggtgacaggggttcagttggtgagcctggtccaaaaggagaacaaggtcgtgctggt
gaagaaggtgaagcaggaggaaaaggagaactaggagatataggattgccaggcccaaag
ggatctgtgggtaaccctggagagcctggtttaagagggcctgaaggatcacgtgggttg
cctggagaggaaggatccagagggccccctggacctcgaggcatgcaaggtgaacgaggt
ccgacaggtcttcctggcatccagggcccagcgggcagagcaccaacagatcagcatatt
aagcaggtttgcctaagagttatgcaagagaatctagccctgatggctgctagcctgagg
aggcctgactcaggtgcttctgggctaccaggaagacctggaccaccaggtccacctggg
cccccaggagagaatggttttccaggccagatgggaccccgtggactcccaggtcttaaa
ggtcctcctggtgaacttggtttgagaggccctaaaggtgacttgggtgaaaggggtgag
agaggacctcctggaagaggacccaaaggcttgccaggatcaattggtctcccaggtgat
ccaggtccagcaagctatgggaaagaaggacgggatggagaacgaggcccaccaggtcct
gcaggaatacctggagtccctggtcctcctggccctgctggtccccctggtttctgtgag
ccagcctcctgtgcagtacaggctggccagcgtgctttcagcaaagggccagatcagtga
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