Trichosurus vulpecula (common brushtail): 118857806
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Entry
118857806 CDS
T10126
Symbol
DDX4
Name
(RefSeq) probable ATP-dependent RNA helicase DDX4 isoform X1
KO
K13982
probable ATP-dependent RNA helicase DDX4 [EC:
5.6.2.7
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tvp03036
]
118857806 (DDX4)
Enzymes [BR:
tvp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
118857806 (DDX4)
Chromosome and associated proteins [BR:
tvp03036
]
Eukaryotic type
Gene silencing
piRNA pathway
118857806 (DDX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
118857806
NCBI-ProteinID:
XP_036624218
LinkDB
All DBs
Position
1:419305545..419363518
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AA seq
780 aa
AA seq
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MGPGAPRPSGRGGHRASPLPLTLLHGRMAAMEGRERGKAGVGAPHCPASRLVATMGDEDW
DTEILKPHMPSFAPAFDKDSFSSGANGDAFNRASDSSEISDAPTRRDQFMRSGFASGRSL
GNRDASDQSSKRENLSTMGGFGPGKGFGNRGFSSNKFEEGDSSSFWRESNDYEDNQTRSR
GLARRGGYQDGNDSEASGSSRRGGRGSFRGCRGGFGLTHNSESEREDGPQRPGGFFSSRR
TGLVDPAGNGDSFRGRSVGGRGGYKGFNEEVVAGSGRNTWKSEAEGESGDFQGPKVTYIP
PPPPENEEAIFAHYQTGINFDKYDTILVEVSGHDAPPAILTFEEADLCQTLNNNITKAGY
TKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAHMMRDGVTASRFKDQQEPEC
IIVAPTRELINQIFLEARKFSFGTCVRPVVIYGGTQLGHSIRQIMQGCNILCATPGRLMD
IIGKEKIGLGQIRYLVLDEADRMLDMGFGPEMKKLISFPGMPSKEQRQTLMFSATFPEEI
QRLAGEFLKTDYLFVAVGQVGGACSDVQQTVLQVGQYSKREKLVEILRNIGEERTMVFVE
TKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLDIEN
VQHVINFDLPSTIDEYVHRIGRTGRCGNTGKAISFFDPEPDSHLAQPLVKVLSDAQQDVP
AWLEEIAFSTYVPGFSGGTSRGNVFASVDTRKSYQGKSSMNIVGFSSAQAPNPVDDESWD
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgggaccaggggcccccagaccgtccggccggggcggacaccgcgcctcgccgctgcct
ctcacccttcttcatggtcgaatggcagcaatggagggaagggaaagagggaaggccggg
gtgggggcccctcattgcccggcatcgagacttgtggccaccatgggtgatgaagattgg
gacacagaaatcctcaaacctcacatgccgtcttttgcccctgcatttgacaaggattct
ttttcttcaggagccaatggagatgcttttaatagggcttcagattcatcagaaatcagt
gatgcacctacccgaagagatcaattcatgagaagtggatttgcttctggacggagtttg
ggaaacagagatgccagtgatcagtcttctaagagagaaaatctatccacaatgggtggc
tttggacctggaaagggttttggaaacagaggtttttcaagtaacaaatttgaagaaggt
gatagctctagcttttggagagaatctaatgactatgaagataatcagacaaggagcaga
ggattggccaggagaggaggttatcaagatggaaatgattcagaagcttcagggtcatca
agaagaggtggacgtggcagtttccgaggttgccgtggaggatttggcctcactcacaat
agtgaatctgaacgtgaagatgggcctcaacgccctggtggattttttagttcaagaaga
acaggattagttgatccagcaggtaatggtgacagtttccgaggcagaagtgttggtgga
agaggtggttacaaaggattcaatgaagaagtagtggcaggttctggaagaaacacttgg
aaatcagaggctgaaggagaaagtggtgactttcaaggaccaaaagtgacctacatacca
cctcctccacctgaaaatgaagaagctatctttgcacactaccagactggcataaacttt
gacaaatatgatactattcttgtggaagtatctgggcatgatgctccaccagcaatactg
acttttgaagaagctgatctctgtcagacactcaataacaacataactaaagctggttat
accaaacttactcctgttcaaaaatatagtattcctattatactggcagggcgagatctg
atggcttgtgctcagacagggtctgggaaaactgcagcttttcttttgccaattttggct
catatgatgagggatggagtaactgccagtcgttttaaagatcagcaggaaccagagtgt
attattgttgctccaactagagagttgatcaaccagatctttttggaagcaaggaaattt
tcatttgggacttgtgtaagacctgttgtaatctatgggggaacacaattgggacattca
attcgccaaataatgcaaggctgtaacattttatgtgctaccccaggaaggctaatggac
atcataggtaaagaaaagattggtcttgggcaaatcagatatttggtattggatgaagct
gaccgaatgctggatatgggttttggtcccgaaatgaagaagctaatttcctttccagga
atgccatcaaaagagcaacgccaaaccctaatgtttagtgccacttttccagaggaaatt
caaagattggctggagaatttttaaaaactgactatttgtttgttgctgttggacaagtg
ggtggagcttgtagtgatgttcaacagactgttttgcaagttggccagtactcaaaaaga
gaaaaacttgttgaaattctacgaaacataggtgaggaaagaacaatggtgtttgttgaa
actaagaaaaaagctgattttattgcaacctttctttgtcaagaaaaaatatcaacaaca
agtattcatggtgatcgggaacagagggagagagagcaagctcttggggattttcgatgt
ggaaaatgtccagtccttgttgctacttcagtagctgccagagggctagatattgaaaat
gttcaacatgttattaattttgaccttccttctaccatcgatgaatatgttcaccgaatt
ggacgtactggtcgctgtgggaacactggcaaagctatttctttctttgatccagaacca
gatagccatttagcacaacctttagtaaaagtactgtcagatgctcaacaggatgtccct
gcatggttagaagaaattgctttcagtacatatgtccctggcttcagtggtggtacttca
aggggaaatgtgtttgcctcagttgatactcggaagagttaccaaggcaagagcagcatg
aacattgtagggttttcttctgcacaagctccaaatccagtagatgatgagtcatgggat
taa
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