Trichosurus vulpecula (common brushtail): 118858246
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Entry
118858246 CDS
T10126
Name
(RefSeq) antigen peptide transporter 2-like
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp02010
ABC transporters
tvp04145
Phagosome
tvp04612
Antigen processing and presentation
tvp05163
Human cytomegalovirus infection
tvp05168
Herpes simplex virus 1 infection
tvp05169
Epstein-Barr virus infection
tvp05170
Human immunodeficiency virus 1 infection
tvp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
118858246
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118858246
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
118858246
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
118858246
05168 Herpes simplex virus 1 infection
118858246
05163 Human cytomegalovirus infection
118858246
05169 Epstein-Barr virus infection
118858246
09163 Immune disease
05340 Primary immunodeficiency
118858246
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvp02000
]
118858246
Enzymes [BR:
tvp01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
118858246
Transporters [BR:
tvp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
118858246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_22
AAA_30
AAA_29
AAA_23
AAA_16
HopA1
AAA_25
AAA_15
Zeta_toxin
SRP54
RsgA_GTPase
Motif
Other DBs
NCBI-GeneID:
118858246
NCBI-ProteinID:
XP_036624627
LinkDB
All DBs
Position
7:complement(269269501..269282289)
Genome browser
AA seq
705 aa
AA seq
DB search
MQLPALKPWVPVLLTDLTLLWLLQELECSLFLPGLSGLWLEGAFRMGVLWGVLSLLGELG
KVGELLPTLCLSIPLFLSLRTLVPGALNAPPVLLASAPWTWMLVAYGGVGLGWAVWEVLS
PSEPLLLAQEKEQGQKNKAMMWRLLRLSWPDLPFLVAAFIFLTVAVIGETFIPHYTGRVI
DILGQDFDSDTFVTAIFFMCLFSLGSLFFAGCRGYLFTIVLSRINLRIRRLLFSSLLRQD
LSFFQKNKTGELNSRLSSDTILMSRWLPGNANVLIQNLMKVMGQYIFMLNLSPWLTLLSL
FEIPLLMAAEKVFNARHQAILRRMQDTVATARQVVQEAVGNLITVRSLGAEEDEAQRYKE
ALEHRRKLQWRQDMEYGVYVLFKQGLQLGMHILILNCGLRQMLAGELTTGALLSFLLYQK
DVGRCVKSLLHVCGDTVSKVGAAEKVFQYLDCEPQMSPNGMLAPSTLQGFVEFQEVSFAY
PTNPKNFVLKGVTFTLHPGKVTALVGPNGAGKSTVAALLQNLYQPTGGRLLLDGKPLPQY
QHQYLHSQVSVVEQEPVLFSGSVRDNIVYGLESCGDDEVKAAAQAAHADGFIANMEHGLN
TAVGEKGNQLSAGQKQCLAIARALVRNPCVLILDEATSALDMEFEQALQKCMFQGGRAVL
MITHRLQTVQAADQILVLEQGKLVEQGTHAQLLAQRGLYYHLVHQ
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgcagctccctgccctgaagccctgggttcctgtcctcctgactgatctgactttgctg
tggttgctgcaggaactcgaatgctccctattccttccagggctctctgggctctggctg
gagggggcctttcgaatgggggtgctgtggggagttctaagtctattgggggagcttggg
aaggttggggaattactgcctaccttgtgcctgagcatccccctgttcctgtccctgagg
accctggttccaggggccttgaatgccccacctgtgctcctagcctcagccccatggacc
tggatgctggtggcttatggaggagtgggactgggctgggctgtgtgggaggttctgagc
ccctcagaaccccttctcttagcacaggagaaggagcaaggccagaaaaacaaagccatg
atgtggaggctgctgaggctgtcctggccagacttgcccttccttgttgcagcattcatc
ttcttgactgttgcagtcataggtgagacgttcatcccccactataccggtcgtgtgatt
gacatcctgggccaggactttgactctgatacctttgtcactgccatcttcttcatgtgc
ctcttctcccttggaagcttattctttgcaggctgtcgaggatacctcttcaccattgtc
ctctcccgaatcaaccttcgcattcggcgtctgctcttttcctccctgctgcgccaagac
cttagtttcttccagaagaacaagacaggggagttaaactcacgcctgagctctgacact
atcctaatgagtcgctggctccctggcaatgccaatgtgctcattcagaacttgatgaag
gtcatggggcaatacatcttcatgctcaacctctcaccttggctcaccctcctttccctg
tttgagatacccctcttaatggctgctgagaaggtctttaatgccagacatcaggcaata
ctccgtaggatgcaagatacagtagcaacggctagacaggtggtgcaggaggcagtggga
aacttgataactgtgaggagtttgggggcagaggaggatgaggcccagcgctataaggag
gccctggagcatagacggaaactacagtggcgccaggacatggaatatggagtgtatgtg
ctcttcaagcagggacttcaactagggatgcatatattgatattgaattgtgggctaagg
cagatgctggctggagagctcacaacaggggccctgctctctttcctgctttatcagaag
gatgttgggagatgtgtgaagagcctgttgcatgtctgtggagatacggtgagcaaagtt
ggagctgccgagaaggtgttccagtacctcgactgtgagccacagatgtcccccaatgga
atgcttgctccttctactctgcagggctttgtagaattccaagaagtctcttttgcctat
cctaccaacccaaaaaactttgttctcaagggagtcacattcactctgcaccctgggaag
gtgacagccctagtggggcccaatggggctgggaagagcacagtggctgcattgctacag
aatctgtatcagcccacagggggccggctgctgctggatgggaagcccctgccacagtat
caacaccagtacctccactcacaggtgtctgtggttgagcaggagcctgtgctgttctca
gggtcagtgagggacaacattgtttatgggctggagagctgtggggatgatgaggtgaag
gctgctgcccaggcagcccatgctgatggattcattgccaacatggagcatgggctgaac
acagctgttggggagaaggggaaccagttgtctgcaggacagaagcagtgcctggccatt
gctcgggccctggtgcggaatccctgtgtcctcatcctggatgaggccaccagtgccctg
gatatggagtttgagcaggcgcttcagaagtgtatgtttcaggggggtcgggcagtgctg
atgatcacacaccgcctgcagactgtacaggctgctgaccagatcctagtgctggaacag
gggaagcttgtggagcaggggacccatgctcagctcctcgcccagagaggcctttattac
cacctggtacatcagtag
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