Trichosurus vulpecula (common brushtail): 118858566
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Entry
118858566 CDS
T10126
Symbol
DEPDC5
Name
(RefSeq) GATOR complex protein DEPDC5 isoform X1
KO
K20404
SEA/GATOR complex protein SEA1/DEPDC5
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
118858566 (DEPDC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tvp04131
]
118858566 (DEPDC5)
Membrane trafficking [BR:
tvp04131
]
Autophagy
Other autophagy associated proteins
SEACIT/GATOR1 complex
118858566 (DEPDC5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEPDC5_CTD
vWA_IML1
IML1_N
IML1_small
DEP
IML1_N_fung
Motif
Other DBs
NCBI-GeneID:
118858566
NCBI-ProteinID:
XP_036625029
LinkDB
All DBs
Position
1:complement(12732276..12851576)
Genome browser
AA seq
1584 aa
AA seq
DB search
MRTNKVYKLVIHKKGFGGSDDELVVNPKVFPQIKLGDIVEIAHPNDEYSPLLLQVKSLKE
DLQKETISVDQTVTQVFRLRPYQDVYVNVVDPKEVTLDLVELTFKDQYIGRGDMWRLKKS
LVSTCAYITQKVELAGIRAQAGELWVKSEKVMCGYISEDTRVVFRSTSAMVYIFIQMSCE
MWDFDIYGDLYFEKAVNGFLADLFTKWKEKNCSHEVTVVLFSRTFYDAKSIDEFPETHRA
SIRQDHEGRFYEDFYKVVVQNERREEWTSLLVTIKKLFVQYPVLVRLERAEGFPQGDNST
SAQGNYLEAINLSFNVFDKHYINRNFDRTGQMSVVITPGVGVFEVDRLLMILTKQRMIDN
GIGVDLVCMGEQPLHAVPLFKLHNRSGPRDSRLGDDYNIPHWINHSFYTSKSQHLCNSFT
PRIKLAGRKPVTEKAKNGRDTSIGTPKESENALPIQVDYDAYDAQVFRLPGPARAQRLTT
FRSVRERESQARKSSSSFDVSSSPSVQSRTLPPEEVRSQASDDSSLGKGSHILLIPHTHL
HQYDVSSSLGYTSTRDVLENMMETQQRDSSAPGRFHVGSAESMLHIRPGGYTPQRALINP
FAPSRMPMKLTSNRRRWMHTFPVGPSGEAIQIHHQTRQNMAELQGRGQRDLTHSSAELLE
LAYHEAAGRHLPSRQPGDGTSFLNFSGTNEFSARLSHSGTGSRTQNKDSLEDGVSASSDP
MPGFCCTVGVDWKSLTTPACLPLTTDYFPDRQGLQNDYTEGCYDLLPEADVDRRDEEGMQ
MTAQQVFEEFICQRLMQGYQIIVQPKLQKANPAVAPPLSSSPLYSRGLVSRNRPEEEDQY
WLSMGRTFHKVTLKDKIITVTRYLPKYPYESAQINYTYSLCPSHSDSEFVSCWVEFSHER
LEEYKWNYLDQYICSAGSEDFSLIESLKFWRTRFLLLPACVTATKRITEGEAHCDIYGDK
PRSDEEEWQLLDGFIRFMEGLNRIRRRHRSDRMIRKGAAMKGLQMAGPLPAHSLEPAGPP
VGKKGTSALSALLEMEASQKCLGEQQSSLHAGKGPTHPAENSGVALTPTYLDSPRKEGAF
FTESVRSPRVAPSTFYPQVSVDQSTAPALDGTSLGISVGQPADRGSAQTAGEQGYPPANP
SDSSSQQFPASSLTTASTLLEILEAMKHPSTGIQLLSEQKGLSASCFISAEVVHWLVSSV
EGVQTQAMASDIMQKMLEEQLITHASGEALRTFIYGFYFYKIVADREPDRVGLQQPATWH
TAAMDDFTAFQRKWFEVAFVAEELLHSEIPAFLLPWLPSRPASYASRHSSFSRSFGGRSQ
AAALLAATVPEQRTVTLDVDVNNRTDRLEWCSCYYHGNFSLNAAFEIKLHWMAVTAAVLF
EMVQGWHRKATSCGFLLVPVLEGPFALPSYLYGDPLRAQLFIPLNISCLVKEGSEHLFDS
FEPETYWDRMHLFQEAIAHRFGFVQDKYSASAFNFPSENKPQYIHVTGTVFLQLPYSKRK
FSGQQRRRRNSTSSTGQNMFCEERVGYHWAYNTMLTKTWRSSATGDEKFADRLLKDFTDF
CVNRDNRLVAFWASCVEKMHASAP
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgagaaccaacaaagtctacaagctggtcatacacaagaagggctttgggggcagcgat
gatgagcttgtggtgaatccaaaagtgttcccccagatcaagctgggggacatcgtggag
attgcacatcccaatgacgagtacagccctctgcttttgcaggtgaagtcccttaaggaa
gacctacagaaagaaacgatcagtgtggaccagacggtgactcaggtgtttcggctgaga
ccttaccaggatgtctacgtgaatgttgtcgaccccaaggaggtgactcttgacctggtg
gaactcacttttaaggaccagtacattgggcgtggggatatgtggaggctgaaaaaaagc
ttggtcagcacatgcgcctacatcactcagaaggtggaattggcaggtatccgggcccag
gcaggtgagctgtgggtgaagagtgagaaggtcatgtgtgggtacatcagcgaagacaca
cgggtggtgttccgttcgacttcagccatggtttatatatttattcagatgagctgtgaa
atgtgggattttgatatttatggagatttgtattttgaaaaagctgtgaatggtttcctc
gctgacctctttaccaagtggaaggaaaagaattgtagccacgaagtgaccgtggtcctg
ttttctaggactttctatgatgcgaaatcaattgatgagtttcctgagacacaccgagcc
tcaattcgacaggatcatgaaggcagattttatgaagatttttacaaggtggtggttcag
aacgagagacgagaagagtggacatcgctcttagtgaccattaagaagctctttgtgcag
tacccggtgctggtgcggctggagcgggcagagggctttcctcaaggtgacaattctacc
tcagcccaggggaactacctggaggccattaatctgtcattcaatgtgtttgacaagcac
tacatcaaccgcaattttgaccggacggggcagatgtcggtggtcatcacccccggggtc
ggcgtgtttgaggtggaccggctcctcatgatcctgaccaagcagcgcatgatcgacaat
gggatcggtgtggatttggtgtgcatgggggagcagccgctgcatgctgtgccactgttt
aagctgcataatcgaagcggtcctcgggattctcgcctcggggatgactacaatatccct
cactggataaaccacagtttctacacctccaagagtcagcatctgtgtaacagcttcacc
ccacgaatcaagctggcgggaaggaagcctgtgaccgaaaaagcaaaaaatggccgggat
acctcaatcgggaccccaaaggagtcggagaatgctctgcccatccaggtggactatgat
gcctacgatgcccaagtgttcaggctgcccggcccagcccgtgctcagcgcctcaccacc
ttcaggtccgtgagggagcgagagagccaggctcggaagagttccagctcctttgatgtg
tcctcgagcccctcggtgcagagtcgcaccctacccccagaggaggtgaggagccaggcc
tcagacgacagctctcttggcaagggctcccacatcctgcttatccctcacacacacctg
caccagtatgacgtcagcagctccctgggctacaccagcacacgagatgtcctggagaac
atgatggagacccagcagcgggactcgagtgcaccagggaggttccatgtgggcagcgcc
gagtccatgttgcacatccgtcccggcggctacacgccgcagcgagctctgattaacccc
tttgcgccatctcgcatgcccatgaagctgacatccaacagaaggaggtggatgcacacc
ttccctgtgggtccgtccggagaagccatccagatccatcaccagacccgccagaacatg
gccgagctccagggcagggggcagcgggatctgactcactcgtctgcggagctgctggag
ctggcatatcacgaagccgcgggaaggcacctcccttcccgccagcctggggatggcacg
tccttcctgaatttcagtggaacaaatgagttttctgcccgcctcagccacagtggcaca
ggatccaggacccagaacaaggattctctagaagacggcgtatctgcctcttcagatcca
atgccaggcttctgttgcacagtcggagtggactggaagtctctcactactccggcctgc
ctgcccctcaccaccgactacttcccagaccgccagggcctccagaatgactacacagaa
ggctgttacgacttgctcccggaggcggacgtggacaggagggatgaggagggcatgcag
atgactgcccagcaggtgttcgaggagttcatttgccagcgtctcatgcagggctaccag
atcatagtgcagccaaagctgcagaaggccaacccagctgtggcccctcccctgagcagc
agccccctctacagccgtggcctcgtgtcccgaaaccgccctgaagaggaggaccagtac
tggctgagcatggggcgtactttccacaaagtaacgctgaaggacaaaatcatcacggtc
acccgctacctgcccaagtatccctacgagtctgcccagatcaactatacctatagcctg
tgcccttcccactcggactcggagtttgtctcctgctgggtggagttctcccatgagcgc
ctggaggaatataagtggaattacctggaccagtacatctgctcagcaggctccgaagac
ttcagtttaattgagtcgctgaagttctggaggacgcgcttcctgctgctcccggcatgc
gttacagccaccaagcgcatcactgaaggcgaggcgcactgcgacatctatggggacaag
ccgcgctcggacgaggaggagtggcagctcctagacggcttcatccgcttcatggaaggc
ttgaaccgcatccggcggcgccatcgctcagaccgcatgatacggaaaggggctgccatg
aaaggcttgcagatggccggccccctccctgcccactccctggagcctgcaggacccccg
gttggaaagaaggggacgtctgccctctcagctttgctggagatggaggccagtcagaag
tgcttgggagagcagcaaagcagtctgcatgctggcaagggccccactcatccagcagag
aacagtggggtggctctcacgcccacctacctggacagtcctcgaaaggagggggccttc
tttacggagtctgtccgcagcccacgtgtggcaccgtccaccttctatccccaggtctcg
gtggatcagagcactgctccagccttagatggcaccagcctgggcatcagcgtgggccag
cctgcggacaggggcagcgcacagactgctggggagcagggctacccaccagcaaatccc
agcgatagcagctctcagcagttcccggccagctcgctgacaaccgcgtccaccttgctg
gagatcctggaggccatgaagcacccctcgacaggcatccagctgctctcagagcagaag
ggtctctctgcgtcctgcttcatcagcgcggaggtcgtgcactggctggtgagcagtgtg
gagggcgtgcagacccaggccatggccagtgacatcatgcagaaaatgctggaggagcag
ctcatcacgcatgcctcgggggaagccttgcgcaccttcatctatggcttctacttctac
aagattgtggccgacagggagcccgaccgagtgggcctgcagcagcccgccacgtggcac
acggcggccatggacgacttcacggccttccagaggaagtggtttgaagtggccttcgtg
gccgaggagctgctacactcggagatccccgccttcctgctgccctggctccccagccgc
cccgcgtcctatgccagccggcacagctccttcagccgcagcttcggtgggaggagccag
gccgccgcgctgctagcggccacggtgcccgagcagaggacggtgaccctggatgtggat
gtgaacaaccgcacggaccggttggagtggtgcagctgctattatcatggcaatttctcc
ctgaacgcagccttcgagatcaagctgcactggatggcggtgacggccgcggtgctcttt
gagatggttcagggttggcaccggaaggccacttcctgcggcttcttgctggtcccagtt
ttggaaggcccgtttgccctgcccagttacctgtatggagatccactgcgagctcagctg
tttatcccgctcaacatcagctgcttggtgaaggagggcagtgagcatctgtttgatagt
tttgaaccagaaacttactgggatcgtatgcatctcttccaggaagccattgctcacagg
tttggatttgtgcaagacaaatactctgcttctgccttcaactttccttcagaaaacaag
ccacagtacatccatgtcacagggaccgtcttcctgcagctgccctactccaagcgcaaa
ttctcaggccagcagcggcgcagacgcaactcaaccagctccaccggccagaacatgttc
tgtgaggagcgtgtgggctaccactgggcctacaacaccatgctgaccaagacatggcgc
tccagtgccactggggacgagaagtttgccgacaggctactaaaggatttcaccgacttc
tgcgtcaaccgtgacaaccgcctggtggcattttgggccagctgtgtggagaaaatgcat
gccagcgctccctga
DBGET
integrated database retrieval system
