Trichosurus vulpecula (common brushtail): 118858898
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Entry
118858898 CDS
T10126
Symbol
SLC1A6
Name
(RefSeq) excitatory amino acid transporter 4
KO
K05617
solute carrier family 1 (high affinity glutamate/aspartate transporter), member 6
Organism
tvp Trichosurus vulpecula (common brushtail)
Pathway
tvp04082
Neuroactive ligand signaling
tvp04721
Synaptic vesicle cycle
tvp04724
Glutamatergic synapse
tvp05017
Spinocerebellar ataxia
Brite
KEGG Orthology (KO) [BR:
tvp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
118858898 (SLC1A6)
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
118858898 (SLC1A6)
04721 Synaptic vesicle cycle
118858898 (SLC1A6)
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
118858898 (SLC1A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
tvp02000
]
118858898 (SLC1A6)
Transporters [BR:
tvp02000
]
Solute carrier family (SLC)
SLC1: High-affinity glutamate and neutral amino acid transporter
118858898 (SLC1A6)
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Gene cluster
GFIT
Motif
Pfam:
SDF
Motif
Other DBs
NCBI-GeneID:
118858898
NCBI-ProteinID:
XP_036625365
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Position
1:65777133..65791864
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AA seq
564 aa
AA seq
DB search
MSSHANSLFLRESVSQRLGGQSWLQGFQDSMQQRAARTRLQIQTMNRERVFRFLRRNAFI
LLTVSAVVIGISLAFALRPYQLTYRQIKYFSFPGELLMRMLQMLVLPLIVSSLITGMASL
DNKASGRMGMRAAIYYMVTTVIAVFIGILMVTIIHPGKGSKEGLHREGRIESIPTADAFM
DLVRNMFPPNLVEACFKQFKTQYSTRVVTRTVMKMENRTGLGISPSPLSLMDNGTSVFDN
VSRALGTLQEVLSFEETVPVPGSASGINALGLVVFSVSFGLVTGSMKQKGHALKVFFNSL
NEAIMRLVGVIIWYAPVGILFLIAGKILEMEDTAVVGGQLGMYTLTVIVGLLIHAGGVLP
LLYFLITHKNPFPFIAGMLQALITAMGTSSSSATLPITFRCLEENLGVDRRITRFVLPVG
ATINMDGTALYEALAAIFIAQVNNYELNLGQITTISITATAASIGAAGIPQAGLVTMVIV
LTSVGLPTEDITLIIAVDWFLDRLRTTTNVLGDSVGAAIIEHLSRKELELQDAELSLPSL
GKSYQLIAQEKGANRARGGNESNM
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgagtagccacgccaatagtcttttcctgagggaaagtgtttcccagcgccttgggggg
cagagttggctacaaggttttcaggattccatgcaacagcgtgctgcccgaacccggttg
caaatccaaactatgaaccgagagcgagtgttccggttccttcggagaaatgccttcatc
cttctcacagtcagtgctgtggtcatagggattagtcttgcctttgcccttcgtccttat
cagctgacctatcgtcagataaaatacttctcttttcctggagagctgctgatgaggatg
ttgcaaatgttggtgttgccgctcattgtctccagcctaatcacaggtatggcatctctg
gacaacaaggcttcagggcggatggggatgcgggctgctatttactatatggtgacaaca
gtcattgcagtcttcattggcatcctcatggtcaccatcatccaccctgggaaaggatcc
aaagaagggctgcaccgagagggccgcattgaatctatccctacagctgatgccttcatg
gacctcgtcaggaatatgttcccacccaatcttgtggaagcctgcttcaaacagtttaag
acgcagtacagcaccagagtggtgacaaggaccgtcatgaagatggaaaacaggacagga
ctgggcatctccccttcacctctttctctaatggacaatggtactagtgtcttcgacaat
gtttctcgtgcccttggcaccctgcaggaggtactgagttttgaggagactgtgcccgta
cctggctcagctagtggcatcaatgctctgggcttggtggtattctcggtcagttttggc
ctggtcactggcagcatgaaacaaaagggccatgccctgaaggtattcttcaacagcctc
aatgaagccattatgagacttgttggtgttattatctggtatgctcctgtgggtatcctc
ttcctcatcgctgggaagatcctagagatggaggacacagctgtagttggtggacagctg
ggcatgtatacactgactgtcatcgtgggcctgctcatccatgctgggggtgtcctccca
ctcctctacttcctcatcacacacaagaatcccttccctttcatcgctggcatgctgcag
gccctcatcaccgccatgggcacttcctccagctcagcaactctgcccatcaccttccgg
tgcttggaggagaaccttggcgtggatagacgcatcaccaggtttgtgctgcctgtggga
gcgaccatcaacatggatggcactgccctctatgaagccttggcagccatcttcatagcc
caggtcaacaattatgaactcaacctggggcagatcaccaccatcagtatcacagccaca
gctgccagcataggggctgcgggcattccccaggctggccttgtcaccatggtcattgtg
cttacctctgttgggctcccaactgaggatatcacactcatcatagctgtggactggttc
ttggaccgcctccgaactaccactaatgttctgggggactcagtaggtgctgccatcatt
gagcatctgtctcggaaggagctggagctgcaggatgctgagctaagcctcccaagcctt
ggaaagtcttatcagctcatcgcccaggagaagggagccaatagagctcggggaggcaat
gaaagcaacatgtga
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