Thioalkalivibrio versutus: TVD_03695
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Entry
TVD_03695 CDS
T03959
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
tvr
Thioalkalivibrio versutus
Pathway
tvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
TVD_03695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvr03019
]
TVD_03695
03016 Transfer RNA biogenesis [BR:
tvr03016
]
TVD_03695
Enzymes [BR:
tvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
TVD_03695
Messenger RNA biogenesis [BR:
tvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
TVD_03695
Transfer RNA biogenesis [BR:
tvr03016
]
Prokaryotic type
tRNA degradation factors
TVD_03695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
AKJ94525
UniProt:
A0A0G3FZV5
LinkDB
All DBs
Position
777119..779206
Genome browser
AA seq
695 aa
AA seq
DB search
MAYKKSFQYGNHTVTFETGDIARQASGAVIVNMAETVVLVTVVARKEADPGRDFFPLTVN
YQERTYAAGKIPGGFFKREGRPSEKETLTCRLIDRPIRPLFPEGFKNETQVVATVMSINP
EVDPDIPAMLGTSAALALSGVPFAGPIGAARVGYRAGEYLLNPTYSALADSDLDLVVAGT
ENAVLMVESEANQLSEEVMLGAVMYGHEQMQAAIQAIKELAAEAGKPAWEWQPAASLESL
EEQIQGVVGEELVEAYQIAEKQARTQRIGELRGKAVEALVREDESGPSLDDVKTAFHDLE
YRLVRDRILDGNPRIDGRDTKTVRPIHVDTGVLPRAHGSAVFTRGETQAMVVATLGTDRD
AQIIDALEGERRDRFMLHYNFPPYCTGETGFVGSPKRREIGHGRLAKRGVQAVMPNEADF
PYVLRVVSEITESNGSSSMASVCGTSLALMDAGVPLKAPVAGIAMGLIKEGDRFAVLSDI
LGDEDHLGDMDFKVAGTNDGVTALQMDIKIDGITREIMERALAQAREGRMHILGCMNEVL
PHHRDEMSSHAPRFITMKINPDKIRDVIGKGGATIRALTEETGATIDIQDDGTVKVASTD
QAAGLEAKRRIEELTADIEVGRQYTGKVAKIMDFGAFVSILPGRDGLVHISQISDERVES
VGDFLSEGDSVTVRVLEVDKQGRIRLSMKAVEPES
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
gtggcatacaagaagtcattccagtacggaaaccatacggtcaccttcgaaaccggtgac
atcgctcgtcaggccagtggcgccgtcatcgtcaatatggccgagaccgtggtgctggtc
accgtggtggctcgcaaggaagccgacccgggccgagacttcttccccctgaccgtgaac
taccaggaacgcacctacgcggccggcaagatcccgggtggattcttcaagcgcgagggg
cgtccgagcgagaaggaaaccctgacttgtcgcctgatcgaccgaccgatccgtccgctg
ttcccggaaggcttcaagaacgagacccaggtggtcgcgacggtaatgtcgatcaacccc
gaggtggatcccgatatccctgcgatgctcgggacctcggccgcgctggcgctctccggc
gtgcccttcgccgggccgattggcgccgcgcgagtcggttaccgcgccggtgagtacctg
ctgaacccgacctacagcgccctggcggattccgaccttgatctcgtcgtggcgggcacc
gagaacgccgtgttgatggtcgaatccgaggccaaccagctctccgaagaggtgatgctg
ggtgcggtgatgtacggccacgagcagatgcaggccgcgatccaggcgatcaaggaactg
gcggccgaggccggcaagcccgcgtgggaatggcagccggcggcgtcgctcgaatcgctc
gaggagcagatccagggggtggtcggcgaagaactggtggaggcgtaccagatcgccgag
aagcaggcgcgcacgcagcgcattggcgaactgcgcggcaaggccgtggaggccctggtc
cgtgaagacgagtccgggcccagcctggatgacgtgaagacggccttccacgacctggag
taccgcctggtccgtgatcgtatcctcgacggaaacccgcgcatcgacggccgcgacacc
aagacggtacgcccgatccacgtggatacgggcgtgctgccgcgcgcgcacggctccgcc
gtgtttacccggggcgagacgcaggcaatggtggtggccaccctcggcaccgatcgcgat
gcccagatcatcgacgccctggaaggcgagcgccgcgaccgtttcatgctgcactacaac
ttcccgccttactgcaccggcgaaaccggctttgtcgggtcacccaagcgccgcgagatc
ggccacgggcgcctcgccaagcgtggcgtgcaggcggtgatgccgaacgaggcggacttc
ccctatgtgcttcgcgtggtctccgagatcaccgaatccaatgggtccagctccatggcc
tctgtctgcggtacctcgctggcgctgatggatgccggcgtgccgctgaaggctccggtt
gcaggtattgcgatgggcctgatcaaggaaggcgatcgcttcgccgtgctctccgacatc
ctcggcgacgaggaccatctgggggacatggacttcaaggtggccggcaccaacgacggc
gtgacggcgttgcagatggacatcaagatcgacgggatcacccgcgagatcatggagcgg
gcgctggcccaggcccgtgaaggccgcatgcatatcctcggatgcatgaacgaagtgctg
ccgcatcatcgtgacgagatgtcctcgcacgcgccgcgcttcatcaccatgaagatcaac
ccggacaagatccgcgacgtgatcggcaagggcggggcgaccattcgcgcactgaccgaa
gagaccggcgcgacgatcgacatccaggacgacgggacggtgaaggtcgcctccaccgat
caggcggcgggcctcgaggccaagcgccgtatcgaagagctgaccgcggatatcgaggtc
gggcgccagtacaccgggaaggtggcgaagatcatggacttcggggcgttcgtctcgatc
ctgccgggccgtgacggtctggtccacatctcgcagatctccgacgaacgtgtcgagagc
gtcggcgatttcctctcggaaggggattcggtgacggtgcgggtcctggaagtggacaag
cagggccgcatccgtctgagcatgaaggcggtcgaacccgagtcctga
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