Thioalkalivibrio versutus: TVD_04080
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Entry
TVD_04080 CDS
T03959
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
tvr
Thioalkalivibrio versutus
Pathway
tvr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TVD_04080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvr03019
]
TVD_04080
03009 Ribosome biogenesis [BR:
tvr03009
]
TVD_04080
Messenger RNA biogenesis [BR:
tvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TVD_04080
Ribosome biogenesis [BR:
tvr03009
]
Eukaryotic type
Pre-60S particles
RNases
TVD_04080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKJ94597
UniProt:
A0A0G3G515
LinkDB
All DBs
Position
853977..854540
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AA seq
187 aa
AA seq
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MAVNAENLIWIDLEMTGLEPQTDRILEVATIVTDKDLNILAEGPVIALYQPAEVLEGMDE
WNQRTHGTSGLIERVRNSSSDTRDAEQATLEFLAQYVPKGASPMCGNSICQDRRFMARLM
PELEQYFHYRNLDVSTLKELARRWAPDVIAQLRKNASHQAMQDIRDSIDELRLYRERFIQ
MPPASQN
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
atggccgtgaatgccgaaaacctgatctggatcgatctcgagatgaccggtctggagccg
caaaccgaccggatcctggaggtggcgaccatcgtcaccgacaaggaccttaacatcctg
gccgaagggccagtcatcgccctgtaccagccggccgaggtgctggaggggatggacgaa
tggaaccagcgcacccatggaacatcggggctgatcgaacgggtgcgcaacagctcgtcg
gacacccgcgatgcggagcaggcgaccctggagttcctggcgcagtatgtgccgaagggg
gcctcgccgatgtgtggcaattccatctgccaggaccggcgcttcatggcgcgcctgatg
ccggagttggagcagtacttccactaccgcaatctggatgtctccaccttgaaagagctg
gcgcggcgctgggccccggacgtgatcgcgcagttgcgcaagaacgcgtcgcaccaggcc
atgcaggatatccgcgattcgatcgacgaactgcgcctgtaccgcgaacgcttcatccag
atgccgccggcgtcgcagaactag
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