KEGG   Thioalkalivibrio versutus: TVD_06085
Entry
TVD_06085         CDS       T03959                                 
Name
(GenBank) restriction endonuclease subunit R
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
tvr  Thioalkalivibrio versutus
Brite
KEGG Orthology (KO) [BR:tvr00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:tvr02048]
    TVD_06085
Enzymes [BR:tvr01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     TVD_06085
Prokaryotic defense system [BR:tvr02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   TVD_06085
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N T1R_D3-like ResIII DEAD RecX_HTH1 AAA_22 T1RK_2nd TFIIB
Other DBs
NCBI-ProteinID: AKJ94953
UniProt: A0A0G3G148
LinkDB
Position
1309723..1312803
AA seq 1026 aa
MSAVGQRERLTQQQVLHFFQDDLGYRYLGDWKDRDGNRNIEEDLLRDWLARQGYDERVIN
RTLRELDQAAAIAGSKTLYDANRAVYEKLRYGVHVKPSVQEQTVTVWLIDWANPENNDFA
VAEEVTVAGANTKRPDVVLYINGMVLGVLELKRSTVAVAEGIRQNLDNQKQNFIRPFFST
VQLVMAGNPTEGLRYGVIETPEKHWLQWKEDSVNEDLLMRGLEQVCRKDRLLEIIHDFIV
FDAGTKKTCRHNQYFGIRAAQEFVRRREGGIIWHTQGSGKSLTMVWLAKWIRENVTDARV
LVITDRTELDEQIEKVFKGVDEQIHRTRSGADLIRVLGSSEEWLIGSLVHKFGSSEEGDV
DEFVRDLKGQLPKGFRVPGNLFVFVDECHRTQSGKLHDAMKALLPDASLLGFTGTPLLQK
DKRKSIEIFGPYIHTYKYDQAVSDGVVLDLRYEARDIDQQLTNQQKVDEWFELKTKGLND
YARAQLKKRWGTMQKVLSSRDRLEKIVADILWDMATRDRLVSGHGNAMLVAGSIYSACRL
YEMFQNTELKGKCAIVTSYAPSTADIKGESTGEGETEKLHQYEIYRQMLAAHFDESPETA
MGKVETFEKEVKKRFIDEPGQMKLLIVVDKLLTGFDAPPATYLYIDKNMRDHGLFQAICR
VNRLHTEDKEVGYIIDYKDLFRSLEQSIQDYTGGAFDAFDSEDVEGLLEDRLTKARERLD
ETREAIHALCEAVEPPRDSAAYRRYFVGTSDDPDTQKDNEPKRLALYKHVSAFLRAYANL
ANEMGPAGYSDAEAAEIKAEVEHYEKVREEVKLASGDYIDMKLYEPAMRHLLDSYVRAED
SEKLSEFDDMTLVELIIDRGEEALDALPESMKSDPEAMAETIENNVRRLIIDEMAVNPKY
YERMSELLDALIEQRRKEALEYREYLEKVIELTRQAAGGKGGSTYPSGLETPAQRALYDN
LGQDETLALRLDERVRNVKKADWRGNTFREREVQRAVRAVLEEQVREIGEYDVDEVMKLV
KAQSEY
NT seq 3081 nt   +upstreamnt  +downstreamnt
atgagcgccgtcggccaacgcgaacgcctcacccagcagcaggtgctgcacttcttccag
gatgatctggggtaccgctacctgggggactggaaggaccgggatggcaaccgcaatatc
gaggaagacctgctgcgcgactggctggcgcggcagggatatgatgagcgcgtcatcaat
cgcaccctgcgcgagctggaccaggcggcggcgattgccggcagcaagaccctctatgac
gccaatcgcgccgtctacgagaagctgcgctacggggtacacgtcaagccgtcggtgcag
gagcagacggttaccgtctggctgatcgactgggccaatcccgagaacaacgacttcgcc
gtggccgaggaggtcacggtggccggggccaacaccaagcgcccggatgtggtgctgtat
atcaacggcatggtcctgggcgttctggaactgaaacgctccaccgtggcggtggccgag
ggtatccggcagaacctggataaccagaagcagaatttcatccggccgttcttttccacg
gtgcaactggtgatggcgggtaacccgaccgaggggttgcgatacggcgtgatcgagacg
ccggagaagcactggctgcagtggaaagaggactcggtgaacgaggatctgctgatgcgc
ggcctggaacaggtctgccgcaaggatcggctgctcgagatcatccacgacttcatcgtg
ttcgatgcgggtaccaagaagacctgccggcacaatcaatatttcggcattcgcgcggcg
caggagtttgtgcgtcggcgcgagggcgggatcatctggcacacccaggggagcggcaag
tctctcacgatggtctggctggccaagtggattcgggagaacgtaaccgatgcccgggtg
ctggtgatcacggaccgtacggagctggatgagcagatcgaaaaggtgttcaagggggtg
gacgagcagatccataggacacgcagcggtgcggatctgatccgggtgctcgggagcagc
gaggagtggctcattggctcgctcgtgcacaaattcggtagctcggaggaaggggatgtc
gatgagttcgtccgcgacctgaaggggcaactgcccaagggtttcagggtgccggggaat
ctcttcgtattcgtcgacgaatgccatcgcacccagtcgggcaagctgcacgatgcgatg
aaggcgcttctgcccgatgcctcgctgctcggcttcaccggaaccccgctcttgcagaag
gacaagcgcaagagcatcgagatcttcggtccctatatccatacctacaagtacgaccag
gccgtgagtgatggtgtggtgctggatctgcgctacgaagcccgggacatcgaccagcag
cttacgaaccagcagaaggtggatgaatggttcgagctgaagaccaagggcctaaatgac
tacgcccgtgcccagctcaaaaagcgctggggcaccatgcagaaggtgctgagctcgcgc
gatcggttggagaagatcgtggccgacatcctctgggacatggcgacacgcgaccggctg
gtcagcggtcatggcaacgcgatgctggtagcgggcagcatctactcggcctgccggctc
tacgagatgtttcagaacaccgagctgaagggcaagtgcgcgatcgtgacctcctatgcc
ccgtcgaccgcggacatcaagggcgaatcgaccggggagggtgagacggagaagctccat
cagtacgagatctaccgccagatgctggccgcgcacttcgacgagtcgccggagacagcg
atgggaaaggtggagaccttcgagaaggaggtcaagaagcggtttatcgacgagccaggg
cagatgaagctgctgatcgtggtggacaaactgctcacggggtttgatgcgccgcccgcg
acctatctgtacatcgacaagaacatgcgggaccacggcctgttccaggcgatctgccgg
gtgaaccggttgcatacggaggacaaggaagtcggttatatcatcgactacaaggacctg
ttcaggtcgctggagcagtcgatccaggactacaccggcggggccttcgatgcgtttgat
tcggaggatgtggaaggtcttctggaagaccggttgaccaaggcgcgtgagcgcctcgat
gagacgcgcgaggcaatccacgcgctttgcgaggccgtggagccaccgcgtgacagcgcg
gcgtatcgccgttatttcgtgggcacgagtgatgatcccgacacgcagaaggacaacgag
ccgaagcggttggcgttgtacaagcatgtcagtgcgttcctgcgggcgtacgcgaacctg
gccaacgagatggggccggcgggctacagcgatgccgaggcggccgagatcaaggccgag
gtggagcattacgagaaggtccgcgaggaggtgaagctcgccagtggcgactacatcgac
atgaagctttatgagccggctatgcggcatcttctggacagctatgtccgggcggaggat
agcgagaagctttcagagttcgatgacatgaccctcgtggaactgattatcgatcgggga
gaggaagcgcttgatgccttgcctgaatcgatgaaaagcgacccggaggccatggccgaa
acgatcgagaacaatgtccggcgcttgatcatcgatgagatggcggtcaacccgaagtac
tacgagcggatgtccgagctcctcgatgcgctcatcgagcaacgacggaaagaggctctc
gaataccgggaataccttgagaaggtcatcgaactcactcgccaggcggccgggggcaag
ggagggtcaacctacccctcgggtctagagacaccggcccaaagggcgctgtacgacaac
ctgggacaggatgagactctggcacttcggctggacgaacgcgtgcgcaatgtgaagaaa
gcggactggcggggcaatacgttccgggagcgagaagtccagcgggccgttcgggcggta
ttggaagagcaggtccgtgagatcggagagtacgatgtcgacgaagttatgaagttggtg
aaggcccagagtgagtactga

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