Thioalkalivibrio versutus: TVD_06415
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Entry
TVD_06415 CDS
T03959
Name
(GenBank) pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
tvr
Thioalkalivibrio versutus
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tvr03009
]
TVD_06415
Enzymes [BR:
tvr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
TVD_06415
Ribosome biogenesis [BR:
tvr03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
TVD_06415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AKJ95015
UniProt:
A0A0G3G1C6
LinkDB
All DBs
Position
1387375..1388355
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AA seq
326 aa
AA seq
DB search
MKATREPSGPRTFQVTERGDGQRLDNFLLRELKGVPKGLIYRLVRQGAVRVDGRRAKAHK
RLAVGNEVRVPDLDRPEAASSEIPPKVLDRLRRAIIHEDDDVLVLDKPSGLAVHGGSGLA
FGIIEAMRQLRPDIELELGHRLDRETSGCLLLAKRRSALQEFHAALREGRVEKRYLALLV
GQFAGGQTIECDAPVASGRQEDGRRRMRAGETDSDGPRAREARSVFVPLEAHGAFQLAEV
KIGTGRTHQIRVHGQSIGHPVGGDHDYGLPDANRSLRRHGLKRLFLHAQALAYQSADGER
HIFSAPLPDELTAVLASLDAGGEDDA
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaacgcgcgaaccctccggcccacgtaccttccaggtcaccgagcgtggtgac
ggtcagcggctcgacaacttcctgctccgcgaactgaagggcgtgcccaagggcctgatc
taccgcctggtccgtcagggtgccgtgcgggtggatgggcgccgggccaaggcacacaag
cgcctggcggtcggcaacgaggtccgggtgccggatctggatcgaccggaggcagccagc
agcgagatcccgccgaaggtactggaccggttgcggcgggcgattatccacgaggatgac
gatgtgctggtgctggacaagccatccggcctggcggtgcacggcgggagcgggctggcg
tttggcattatcgaggcgatgcgccagttacggccggatatcgagctggaactggggcac
cgcctggatcgcgagaccagtggctgcctgctgctggccaagcgccgctcggcgctgcaa
gaattccatgccgcgttgcgtgaagggcgggtcgagaagcgctacctggcgctgctggtg
gggcagttcgcgggcggacagaccatcgaatgcgatgccccggtcgccagtggccgacag
gaagacggccgccgccggatgcgtgcgggcgagaccgacagcgacggaccgcgggcacgg
gaagcccggagcgtctttgtgccgctggaggcgcacggtgccttccagttggcggaggtg
aagatcgggaccggccgcacgcaccagattcgcgtccacggtcagtcgatcggccatccg
gtggggggcgatcacgactacggcttgccggatgccaatcgcagcctgcggcgccatggg
ctgaaacggctgttcctgcacgcacaggcactggcataccagtcggcggacggcgagcga
catatcttctccgccccgttgccggacgagctgaccgcggtgctcgcgagcctggatgcc
ggaggcgaggacgacgcatga
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