Thioalkalivibrio versutus: TVD_10925
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Entry
TVD_10925 CDS
T03959
Name
(GenBank) double-stranded RNA-binding protein
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
tvr
Thioalkalivibrio versutus
Pathway
tvr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tvr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
TVD_10925
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tvr03019
]
TVD_10925
03009 Ribosome biogenesis [BR:
tvr03009
]
TVD_10925
03036 Chromosome and associated proteins [BR:
tvr03036
]
TVD_10925
Enzymes [BR:
tvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
TVD_10925
Messenger RNA biogenesis [BR:
tvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
TVD_10925
Ribosome biogenesis [BR:
tvr03009
]
Eukaryotic type
90S particles
RNase
TVD_10925
Prokaryotic type
rRNA processing factors
TVD_10925
Chromosome and associated proteins [BR:
tvr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
TVD_10925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
DSRM_2
RM44_endonuclase
Dicer_dimer
DUF5608
Motif
Other DBs
NCBI-ProteinID:
AKJ96491
UniProt:
A0A0G3GC86
LinkDB
All DBs
Position
complement(2369424..2370101)
Genome browser
AA seq
225 aa
AA seq
DB search
MSRDFRSLLPASVRDGDGIDQALTHRSAGGRNNERLEFLGDAVLGLVIADALYEKLPDAP
EGDLTRLRAALVNRESLADLARETGLEGTLNLGQGERKSGGQRRDSILADAVEALIGVTY
REAGMEAARDFTLALYVERLNDLPSAESLKDPKTRLQEQLQGRNADLPVYEVLEVVGPDH
KRQFTVAVHLPTQGWGQRGQGSSRRRAEQAAAEAALKRLQQVQEQ
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
gtgagccgggattttcgcagtctgctgcccgcgtccgtgcgcgacggcgacgggattgac
caggcgttgacccaccgcagcgccggcgggcgcaataatgagcgcctggagttcctgggt
gacgccgtccttgggctggtgatcgccgacgccctgtacgagaagctcccggacgccccg
gaaggggatctcacccgcctgcgtgcggccctggtcaatcgcgagtcgctggcggatctg
gctcgggagaccggcctcgagggcacgctgaacctggggcagggcgaacgcaagagtggc
ggccagcgccgcgactccatcctggccgatgcggtggaggccctgatcggggtgacctac
cgcgaggccgggatggaggccgcgcgcgactttaccctggcgctgtatgtcgagcgcctg
aacgatctcccgtcggccgaatcgctgaaggaccccaagacccggctgcaggaacaactg
cagggccgcaatgcggatctgccggtctacgaggtgctggaggtggtcggccccgatcac
aagcgccagttcaccgtggcggtccacctgcccacccagggctggggccaacgtggccag
ggctcctcgcgccgtcgcgccgaacaggccgcggccgaggcggccctgaaacgcctgcaa
caggtacaggaacaatga
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integrated database retrieval system
